Pedobacter sp. KBS0701: FFJ24_023310
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Entry
FFJ24_023310 CDS
T06361
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pek03400
]
FFJ24_023310 (radA)
DNA repair and recombination proteins [BR:
pek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FFJ24_023310 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA
AAA_22
Lon_C
AAA_16
AAA_24
AAA_5
nSTAND3
Rad51
AAA_14
CobU
NACHT
ABC_tran
DUF7129
NTPase_1
SLFN-g3_helicase
bpMoxR
DEAD
Hrs_helical
RNA_helicase
PAXNEB
AAA_18
DUF7125
DZR
Motif
Other DBs
NCBI-ProteinID:
QDW27603
LinkDB
All DBs
Position
complement(5735889..5737265)
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AA seq
458 aa
AA seq
DB search
MAKSKTAYFCQSCGYESAKWLGKCPSCNQWNTFVEEIVEKSPASVPTWKNDTSGRKLSKP
SKVDEIQSSTERRILTGDKELDRVLGGGLVEGSLVLIGGEPGIGKSTLMLQLALNIKGKK
LLYISGEESEQQIKMRAERIQENPSSNCYILTETSTQNIFKQIEILEPEILVVDSIQTLH
STHIDSTPGSVSQVRECTAELLRFAKETGVPVFLIGHITKDGAIAGPKILEHMVDTVLQF
EGDRHHVYRILRSIKNRFGAAAELGIYEMQGSGLREVSNPSEILLSQRDEELSGIAIAAT
LEGARPMLIETQALVSSAAYGTPQRSATGFDTKRMNMLLAVLEKRCGFRLSTQDVFLNIA
GGIRVEDPAIDLAVLIAIISSHQDIAVSSKNCFAAEVGLSGEIRAVNRIEQRIAEADKLG
FETIYISKYNLKGIAIEKYNLEIKAVSKIEEVFGLVFG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaatcaaaaaccgcatatttctgtcagagctgtggctacgaatcggcaaaatgg
ctgggcaaatgtccatcctgtaaccaatggaatacctttgtggaggaaattgttgagaag
agccccgcatcagtcccaacctggaaaaacgatacatctggccgcaaattaagtaaaccg
agcaaggtggatgaaatccaatcgtcaaccgagcggagaatattaacgggcgacaaagaa
cttgaccgtgttttaggcggcggtttggtagaaggatctttagtattgattggcggtgaa
ccaggtatcggaaaatcgaccttaatgttacagttagccttaaatataaaagggaaaaag
ttattgtatatttcgggagaagagagcgagcagcagattaaaatgcgggcagagcgaatc
caggaaaatccatcttcaaactgttatattttaacggagacctctacacagaacattttt
aaacagatcgaaattttagaaccagagattttggtggtcgattctatacagacgctacat
tctacccatatcgattcaactccaggcagtgtatcacaggtaagggaatgtacagccgaa
ttattgcgttttgcaaaagaaaccggcgtaccagttttccttattggccatatcactaaa
gatggtgccattgcagggccgaaaatactcgaacacatggttgacacggttttgcaattt
gaaggcgacagacatcatgtttaccgcattttacggtcaattaagaatcgctttggagct
gctgcagaattgggtatttacgaaatgcagggcagtggcttaagagaggtctccaacccc
tcagagatcttgctttcacagcgcgatgaagaattaagcggaattgccattgccgcaacc
ctagaaggcgcaagaccaatgttgattgaaacacaagccttggtgagttcggccgcctac
ggaacccctcaacgctccgcaactggttttgataccaaaagaatgaatatgctcttagct
gttttagaaaaacgatgtggcttcaggttaagcacacaagatgttttcttaaatattgcc
ggcggaatcagggtagaagaccctgcaattgatctggctgtgttaatcgccattatatca
tcgcatcaggatattgccgtgtcttccaaaaattgcttcgctgccgaggtaggtttatca
ggagaaataagagcagtaaacagaatcgaacagcgtattgctgaagcagataaattgggt
ttcgaaaccatttatatctctaaatacaatttaaaaggtattgccatagaaaaatacaac
cttgagattaaagctgtaagtaaaatagaagaagtattcggtcttgtttttggataa
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