Pedobacter sp. KBS0701: FFJ24_023335
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Entry
FFJ24_023335 CDS
T06361
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek03030
DNA replication
pek03430
Mismatch repair
pek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFJ24_023335 (ssb)
03430 Mismatch repair
FFJ24_023335 (ssb)
03440 Homologous recombination
FFJ24_023335 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pek03032
]
FFJ24_023335 (ssb)
03400 DNA repair and recombination proteins [BR:
pek03400
]
FFJ24_023335 (ssb)
03029 Mitochondrial biogenesis [BR:
pek03029
]
FFJ24_023335 (ssb)
DNA replication proteins [BR:
pek03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FFJ24_023335 (ssb)
DNA repair and recombination proteins [BR:
pek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
FFJ24_023335 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
FFJ24_023335 (ssb)
Mitochondrial biogenesis [BR:
pek03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
FFJ24_023335 (ssb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
OSB_SSB
tRNA_anti-codon
YorF
Motif
Other DBs
NCBI-ProteinID:
QDW27608
LinkDB
All DBs
Position
5741712..5742149
Genome browser
AA seq
145 aa
AA seq
DB search
MSGINKVILVGHLGKDPEVRHLDGGVTVASFPLATSETYNKDGKRVEQTEWHNIVLWRGL
AEVASKYLQKGKLVYIEGKLRTRSFEDKEKVKKYVTEIVAENFTMLGRKSDFEQSPTTPA
HQNTETKIDDEFTIGPSDENGDLPF
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggattaacaaagttattttagtaggccatttaggcaaagaccctgaagtgcgg
catttagacggtggcgtaactgtagccagttttccattggctacatcggaaacatataac
aaagacggtaagagagtagaacaaactgagtggcacaatattgtattgtggcgcggattg
gccgaagtagcttccaaatacctgcagaaaggtaaattggtttatatagagggcaaatta
agaacaagatcctttgaagataaagaaaaggttaaaaaatatgtaacagaaattgtggct
gaaaactttaccatgttaggtagaaaaagcgattttgagcaaagtccaacaacaccagcc
catcaaaacactgaaactaaaattgatgatgaatttacaatcggtccgtcagatgaaaat
ggagaccttcccttttaa
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integrated database retrieval system
