Pedobacter sp. KBS0701: FFJ24_023475
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Entry
FFJ24_023475 CDS
T06361
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_023475
Transporters [BR:
pek02000
]
Other transporters
Pores ion channels [TC:
1
]
FFJ24_023475
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Ortholog
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GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
OMP_b-brl_2
DUF6089
NPV_P10
RACo_linker
TSP3_bac
Motif
Other DBs
NCBI-ProteinID:
QDW27636
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Position
5774460..5775806
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AA seq
448 aa
AA seq
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MNYSTLKKSVALSLVALTGVASLAVAQDAPATSSAVKVFGGRGQYRTWSIGVHGGVLMPV
VAIGGSNDFNKWDANLGYGLNIRKQLGHSFGLELNGTRGKLSGTNEGISNPAVKDFETQL
QYAVDLRGVVNVGSIDFLRRENSVGFFLTAGAGYMAYAPKITTGSGQTIDWKGTAVGPAD
DRHDAKDYVKGFYIPVGAGVKFKVSERVNFNLGYTMNFVDADNLDGVYAKGTTKDKFSYG
YAGLEFSLGSSAKPSLEWTNPLATMYDELKDPTLRQEVEALKNRVSAVEKSVEDLKKDTD
GDGVSDQFDKCPGTPAGTAVDGSGCPLPKVAPVDSVASNVTGFEKIGFDFNSSVLKTESY
PTLDKLSSVLRENGGKVTVNGYASSEGTAAYNLKLSKDRANSVKTYLVNSGVNASQVATK
GNGEANPIASNDTEEGRIQNRRVETARN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaattattctactttaaagaaaagtgttgcgctttctttagtggcattaacaggagtt
gcttctcttgctgtcgctcaggatgctcctgcaacctcttctgctgtcaaggtatttggt
ggtagaggacagtacagaacttggtctattggtgtacacggtggtgttttaatgccagtt
gttgctatcggcggttctaatgactttaacaaatgggatgctaatttaggttacggttta
aatatccgtaaacaattaggtcactctttcggattagaattaaacggaacccgtggtaaa
ctttcaggtactaacgaaggtatttctaacccagctgtaaaagacttcgaaactcaattg
caatatgctgtagatttacgtggtgttgtaaacgtaggttctatcgatttcttacgtcgt
gagaattcagtaggtttctttttaactgccggtgctggttatatggcttatgctccaaaa
attactactggttctggtcaaactatcgactggaaaggtactgctgtaggtcctgctgat
gacagacatgatgctaaagattacgtaaaaggtttctacattccagttggtgctggtgtt
aaattcaaagtttctgagcgtgttaactttaatttaggttacaccatgaactttgttgat
gctgataacttagacggagtttatgcaaaaggtacaactaaagataaattctcatacggt
tatgctggtttagaattctctttaggttcttctgctaaaccaagtttagagtggactaac
ccattagctactatgtatgatgagttaaaagatccaactttacgtcaagaagttgaagca
ttaaaaaaccgtgtttctgctgttgagaaatctgttgaagatttgaaaaaagatactgac
ggtgacggtgtttctgatcaattcgataaatgcccaggaactcctgctggtactgctgtt
gatggttcaggttgtcctcttccaaaagttgctccagttgattctgttgcttcgaatgta
actggtttcgaaaaaatcggtttcgatttcaactcttcagttttaaaaactgagtcttac
cctactttagataaattatcttcagtgttacgtgaaaacggtggtaaagtaactgtaaac
ggttacgcttcaagcgaaggtactgctgcatataacttgaaattatctaaagacagagct
aactctgttaaaacttacttagtaaactctggcgttaacgctagtcaagttgctactaaa
ggtaatggcgaagctaatccaattgcttctaacgatactgaagaaggtcgtatccaaaac
cgtcgtgttgaaactgctagaaactag
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