Pedobacter sp. KBS0701: FFJ24_023705
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Entry
FFJ24_023705 CDS
T06361
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek00020
Citrate cycle (TCA cycle)
pek00190
Oxidative phosphorylation
pek00650
Butanoate metabolism
pek00720
Other carbon fixation pathways
pek01100
Metabolic pathways
pek01110
Biosynthesis of secondary metabolites
pek01120
Microbial metabolism in diverse environments
pek01200
Carbon metabolism
Module
pek_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pek_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FFJ24_023705
00650 Butanoate metabolism
FFJ24_023705
09102 Energy metabolism
00190 Oxidative phosphorylation
FFJ24_023705
00720 Other carbon fixation pathways
FFJ24_023705
Enzymes [BR:
pek01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
FFJ24_023705
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
NAD_binding_8
GIDA
Pyr_redox
FAD_binding_3
AlaDh_PNT_C
PALP
FAD_oxidored
Thi4
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
QDW27680
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Position
5838425..5840404
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AA seq
659 aa
AA seq
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MSDINSNIPEGELTSKWTKYKSSVPLVNPSNKRTIEVIIVGSGLAGASAAATLAEMGYKV
KCFCFQDSPRRAHSIAAQGGINAAKNYQNDGDSVYRLFYDTIKGGDYRAREANVHRLAEV
SANIIDQCVAQGVPLAREYGGLLDNRSFGGTQVQRTFYAAGQTGQQLLLGAYSALERQIG
MGKVEMYTRHEMLEVVKIDGKARGIIARNLITGEIERHFGHAVVLGTGGYGNVFYLSTNA
MGSNVTAAWKAHKQGAYFANPCYTQIHPTCIPVSGDHQSKLTLMSESLRNDGRIWVPKKK
DDNRKASEIPEDERDYYLERRYPAFGNLVPRDVASRAAKERCDAGYGVGASKLAVYLDFK
ANTERYGKIEAAKAGNHNPDKETCMRLGTAVIKEKYGNLFDMYAQITGENPYETPMRIYP
AVHYTMGGLWVDYNLMTSVPGLYCTGEANFSDHGANRLGASALMQGLADGYFVLPYTIGA
YLSKEISVKAIPTDHPAFVEAEERAVGILNTLINIKGTKSVDHFHKRLGHIMWEKCGMAR
NEKGLNEAIQEIRALRAEFWSDVRVPGTADELNTELEKAGRVADFIELGELMCIDALNRN
ESCGGHFREEYQTEEGEALRDDENYAYVAAWEFKEGVNFELHKEELKFENIKVAQRSYK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattaattcaaatattccagaaggcgaattaaccagcaaatggacaaaatat
aagtcttctgtgcctttggtaaacccatcgaacaaaagaactattgaggtaattattgta
ggttcgggtttagcaggtgcttcggcagccgctactttggccgagatgggttacaaagta
aagtgtttctgttttcaggattcaccacgtagagcacactcaatcgccgctcaaggtggt
attaatgcagcaaaaaactatcagaatgatggtgatagtgtttatcgcctattttacgat
acgattaaaggtggcgattaccgtgcccgcgaagccaatgtgcatcgtttggctgaagta
agtgccaacattatagatcagtgtgtagcacaaggtgtgcctttggcacgtgagtatggc
ggcttgttagataaccgttcattcggtggtacacaggttcagcgtacgttctatgctgca
ggtcaaactggtcagcagttattattaggtgcatattctgctttagaacgccagattggt
atgggtaaagtagaaatgtatacccgccatgaaatgcttgaggtggttaaaattgatggc
aaagcacgcggtattattgcccgtaatttaattaccggagaaatcgaacgtcactttggt
catgcggtagtattaggaacaggtggttacggaaacgtattctatctttctaccaatgcc
atgggaagtaatgttacagctgcctggaaagcgcacaaacaaggtgcttactttgcaaat
ccttgttacacgcagatccacccgacctgtatcccggtttctggcgatcaccaatctaaa
ttaaccctgatgtctgaatcattacgtaacgatggacgtatctgggtacctaaaaagaaa
gatgataaccgtaaagcttcagaaattcctgaagatgaaagagattattatttagagcgt
cgttatcctgcttttggtaacctggttccacgtgatgtggcttcccgtgcggctaaagag
cgttgcgatgccggttatggagtaggtgcttctaaattggccgtatatttagattttaaa
gcaaatacagaacgctacggaaaaatcgaagctgctaaagcaggtaaccacaatccagac
aaagaaacttgcatgcgcttaggcactgcggtaattaaggaaaaatatggtaacctgttc
gatatgtatgcacaaattaccggtgaaaatccttacgaaaccccaatgcgtatttatcct
gcagttcactatactatgggcggtttatgggttgattataacttaatgacatctgtacct
ggtttatattgtacaggtgaggctaacttctcagatcatggtgctaaccgtttaggtgca
tctgctttgatgcagggtttggctgatggttatttcgttcttccatacaccattggagct
tatttatcaaaagagatttctgtaaaggcaattcctactgatcaccctgcttttgtggag
gctgaagagagagcagttggtattttaaatacgctgatcaatattaaaggaaccaagtcg
gtagatcatttccacaaacgtttaggccacatcatgtgggagaaatgtggtatggcccgt
aacgaaaaaggtttaaatgaagcaattcaggaaatcagagcattacgagctgaattctgg
agcgatgttcgtgtacctggaacagctgatgagttaaatacagaactcgaaaaagcaggc
cgtgtggctgattttatcgaactgggcgagttgatgtgcattgatgctttaaaccgtaac
gaaagttgtggtggtcacttccgtgaagagtatcagacagaagaaggtgaagccttacgt
gatgatgagaactatgcttacgtagctgcctgggaatttaaagaaggtgtaaacttcgaa
cttcacaaagaagaattgaagtttgaaaatattaaagtagcacaaagaagttataaatag
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