Pedobacter sp. KBS0701: FFJ24_023910
Help
Entry
FFJ24_023910 CDS
T06361
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pek
Pedobacter sp. KBS0701
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_023910
Transporters [BR:
pek02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FFJ24_023910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Imm5
Motif
Other DBs
NCBI-ProteinID:
QDW27719
LinkDB
All DBs
Position
complement(5879896..5881479)
Genome browser
AA seq
527 aa
AA seq
DB search
MKYLLTLLACLLLLSSCSKFLEEYSTDQKYLETTDDLNKVMIGEAFMNNVYSLSIYNPAT
MGSISSETDLSTPWLHVMDDDSEAFVLGAADRDQATPLYMLSGFHNWGQNPTVNILGFSW
TDVMWKKIYKRIGAINALIFQASEIAAKNQADANLQHLRGEAYFLRAYYYFLLQNIYGSP
YRKATASTDEGVPLKISEKVEDIYFKRNNNETVYKQIEADLNQAADYLQGYNPTNKIRVG
IAAVKCLQSRIYLFTEQYDKVLQVTNGYENMGYSIIDLKRYVANSNFTYRSSTETIFTMG
TNAVPAVFLNDSLSSYAPVNRLASGFKASDDLIQNFSTNDLRLNAFFMLSAKSKAFLPAK
WRTWRTYNDPEQVSCIFSFRLPEMLLNRAEAQAILGADGEAWSEIQKLQAMRFSNNSGSQ
QPASNLTLVEFIRNERRRELCFEGHRWFDLRRYAVNSKYPLGTDFKIKHPTYNYDAQSNS
YTRAGYYVLNSIAQDQASWQVPIPNYAIEFNRGLLTNPIRSVRNIQP
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatcttttaacccttttagcttgccttttgctgctgagctcctgcagcaagttt
ttggaagaatattctacagatcaaaaatacctggaaaccaccgacgacctgaataaggtg
atgattggtgaggcctttatgaataatgtatatagtttatcgatctataatccggcaacc
atgggaagcatctcttcagagactgacctttctacaccatggctccatgtgatggatgat
gacagtgaagcatttgtgcttggcgctgctgacagagatcaggctactccgctttacatg
ctttctggatttcacaactggggacaaaatcctacagtcaacattttgggcttctcctgg
actgatgtgatgtggaaaaaaatttacaaacgcattggtgccatcaatgcattaattttt
caggcttcagaaattgcagcaaaaaaccaggcagatgcaaacctgcagcatttacgtggt
gaagcctattttcttcgggcctattattatttcttactgcaaaatatttatggttctcct
taccgtaaagcaaccgcttcaacagatgaaggtgtaccgttgaagatttcggaaaaagta
gaagatatctatttcaaaagaaacaataacgaaaccgtttataaacaaattgaggcagat
cttaatcaagccgcagactaccttcaaggctataatcccactaataaaattagggtaggt
attgcggctgttaaatgtttgcaaagccggatatatctatttaccgaacaatatgataaa
gtattacaggtgactaacggatatgaaaatatgggttacagcattattgatttaaagcgt
tatgtagctaacagtaattttacttaccgcagctctacagaaaccatatttaccatgggg
acaaatgctgtgccggcagttttccttaatgattcattgtcatcttatgctcctgtcaac
cgtcttgcttctggttttaaggcttctgatgatctgatacagaattttagtactaatgat
ctgcgcttaaatgccttttttatgctatcggcaaaaagcaaagcttttcttccggctaaa
tggcgtacctggcgaacttataatgaccccgagcaggtatcttgtattttttctttccgt
ttgccagaaatgctgctcaaccgcgcagaagcgcaagctatccttggtgctgatggtgaa
gcctggagtgaaattcagaaattgcaggcgatgcgctttagcaataattcaggcagtcag
caaccggcatccaatctgaccctggttgagtttatccggaatgaacgtagacgagagttg
tgttttgaaggccatcgctggttcgacctgaggaggtatgcggtgaattctaaatatcca
ctgggtacagattttaagatcaaacaccctacttacaattatgatgcgcaaagtaatagt
tatacccgcgccggatattatgtgttaaattctattgctcaagatcaagccagctggcag
gtacccatccctaattatgccatagaatttaataggggattattaactaacccaattcgc
agtgtacgtaatattcaaccttaa
DBGET
integrated database retrieval system
