Pedobacter sp. KBS0701: FFJ24_024530
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Entry
FFJ24_024530 CDS
T06361
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFJ24_024530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pek03032
]
FFJ24_024530
Enzymes [BR:
pek01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
FFJ24_024530
DNA replication proteins [BR:
pek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
FFJ24_024530
Elongation factors (archaeal)
FFJ24_024530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_HII
Tyr_recomb_halo_N
Motif
Other DBs
NCBI-ProteinID:
QDW27836
LinkDB
All DBs
Position
6015960..6016568
Genome browser
AA seq
202 aa
AA seq
DB search
MLLNCYQEEFLEAGCDEAGRGCLAGPVFAAAVILPKGFVLDGLNDSKQLSHEQRALLRPI
IEQEALAWAVASCDHEEIDRINILNASFLAMHRAIEQLHTQPQYLVIDGNRFKTYPQIPH
SCIVKGDGKYLNIAAASILAKTHRDEYMTNLHIDYPHYNWMQNKGYPTIAHRKAVIEIGL
SPFHRRTFNVSDPQLELFSKNA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgttattaaactgttatcaggaagaatttttagaggctggatgtgatgaagctggaaga
ggttgccttgcaggtcctgtttttgctgctgcggttattttaccaaaaggttttgtgtta
gatggattaaatgattctaaacagttatcgcatgagcaaagagcgctgttaaggccaatt
attgagcaagaggctttggcctgggctgtagcttcttgtgatcatgaagaaatcgatcgc
attaatattttaaatgcctcttttttggccatgcacagggcgattgaacaattacatacc
cagccccaatatctggtgattgatggcaatcgtttcaaaacctatccgcagattccgcat
agttgtattgttaagggtgatggtaaatatttaaacattgcggcggcttctatactggca
aaaacgcaccgagatgaatacatgacaaatttacatatcgattatccacattataactgg
atgcagaataaaggctatcccacaatagcacaccgtaaagccgtgatcgaaatcggatta
tcaccctttcaccgtagaacttttaatgtaagcgatcctcagttagaactgttttcaaaa
aacgcttaa
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