KEGG   Pedobacter sp. KBS0701: FFJ24_024720
Entry
FFJ24_024720      CDS       T06361                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pek  Pedobacter sp. KBS0701
Pathway
pek00010  Glycolysis / Gluconeogenesis
pek00020  Citrate cycle (TCA cycle)
pek00260  Glycine, serine and threonine metabolism
pek00280  Valine, leucine and isoleucine degradation
pek00310  Lysine degradation
pek00380  Tryptophan metabolism
pek00620  Pyruvate metabolism
pek00630  Glyoxylate and dicarboxylate metabolism
pek00640  Propanoate metabolism
pek00670  One carbon pool by folate
pek00785  Lipoic acid metabolism
pek01100  Metabolic pathways
pek01110  Biosynthesis of secondary metabolites
pek01120  Microbial metabolism in diverse environments
pek01200  Carbon metabolism
pek01210  2-Oxocarboxylic acid metabolism
pek01240  Biosynthesis of cofactors
Module
pek_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pek_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pek_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pek_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pek00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FFJ24_024720 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FFJ24_024720 (lpdA)
   00620 Pyruvate metabolism
    FFJ24_024720 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FFJ24_024720 (lpdA)
   00640 Propanoate metabolism
    FFJ24_024720 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FFJ24_024720 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FFJ24_024720 (lpdA)
   00310 Lysine degradation
    FFJ24_024720 (lpdA)
   00380 Tryptophan metabolism
    FFJ24_024720 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FFJ24_024720 (lpdA)
   00670 One carbon pool by folate
    FFJ24_024720 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pek04147]
    FFJ24_024720 (lpdA)
Enzymes [BR:pek01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FFJ24_024720 (lpdA)
Exosome [BR:pek04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FFJ24_024720 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like FAD_binding_3 GIDA NAD_binding_8 Lys_Orn_oxgnase Thi4 DAO AlaDh_PNT_C 3HCDH_N zf-C2H2_3rep DHQ_synthase UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: QDW27870
LinkDB
Position
6054143..6055549
AA seq 468 aa
MQYDVVVIGSGPGGYVGAIRCAQLGLKTAVVEKYKTFGGTCLNVGCIPSKALLDSSEHFH
NAAHTFTTHGIDLKSLKVNMPQMIARKDDVVAQNTAGITYLFKKNKIDSYEGVGSFVDKN
TVLITKTDGSTETLTAKNVIIATGSKPTSLPFLPVDKKRIITSTEALNIKEVPKSMVVIG
GGVIGLELGSVYARLGTKVSVIEFLPSIIATMDASLGKELQRVLKKNLGMEFFMNHKVTG
ATNNGKTVTVTAENAKGEAVNFDADYCIVAVGRTAYTEGLGLDKIGITIEERGKKVPVNE
HLETSVRGVYAIGDVITGAMLAHKAEDEGTYVAETIAGQKPHINYNLIPGVVYTWPEVAS
VGLTEEQLKEKGTKYKAGSFPFKASGRAKASMDTDGFIKVLADAATDEVLGVHMIGPRAA
DMIAEAVIAMEFRASAEDIARTCHAHPTYTEALKEAALAATDNRAIHI
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgcaatacgatgtcgttgttatcggttcagggccgggcggttatgtaggcgcaatccgt
tgtgctcagttaggtttaaaaactgcagtagtagaaaaatataaaacttttggaggtact
tgcttaaacgttggttgtatcccatctaaagccttgttagattcatcagagcattttcat
aatgctgctcatacttttactactcacggtatcgatttaaaaagccttaaagtaaatatg
ccgcagatgatcgcccgtaaagacgatgttgttgcacaaaatacggctggtattacttat
ttgttcaagaaaaataaaatcgattcttacgaaggcgttggttcatttgtagataaaaac
acagttttaatcacaaaaactgatggttctacggaaaccttaaccgctaaaaatgtaatc
attgctacgggttctaaacctacatccttgccatttttgccagttgataaaaaacgcatc
attacttcaacagaggctttaaatattaaagaagttccaaagtcgatggttgtaattggt
ggcggagttattggtttggagttaggttctgtttatgcccgtttaggtacaaaagtttca
gtaattgagtttttgccatccatcattgcgacaatggatgcaagtttaggtaaagaactt
caacgcgtattgaagaaaaacctgggcatggaattctttatgaatcataaagttaccggc
gctacaaataatggtaaaactgtaaccgttactgcagaaaacgcgaagggtgaagccgta
aatttcgacgctgattattgcatcgtggcggttggccgtacggcttatacagaaggttta
ggtttggataaaatcggaatcacaatagaagaaagaggtaaaaaagtccctgttaatgaa
catttagaaacttcggttcgtggtgtttacgccattggcgatgtaattacgggtgccatg
ttggcgcataaagccgaagatgaaggtacttatgttgcagaaaccatcgccggacaaaaa
ccacacattaactataacctaattccgggtgtggtttacacctggccggaagttgcatct
gttggtttaacagaagagcagttaaaagaaaaaggaacaaaatataaagcaggttcgttt
ccgttcaaagccagcggacgtgcaaaagcaagtatggataccgatggtttcattaaagtt
ctggctgatgctgcaactgatgaggttttaggtgtacacatgattggtccgcgtgctgcg
gatatgattgctgaggcggttattgctatggaattccgcgcatctgctgaagatatcgcc
cgtacctgccatgcacatccaacttatactgaagcgctaaaagaagcggcacttgctgca
actgataacagagcaatacatatttaa

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