Pedobacter sp. KBS0701: FFJ24_025650
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Entry
FFJ24_025650 CDS
T06361
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek00260
Glycine, serine and threonine metabolism
pek00630
Glyoxylate and dicarboxylate metabolism
pek00670
One carbon pool by folate
pek00785
Lipoic acid metabolism
pek01100
Metabolic pathways
pek01110
Biosynthesis of secondary metabolites
pek01200
Carbon metabolism
Module
pek_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FFJ24_025650 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FFJ24_025650 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FFJ24_025650 (gcvP)
00670 One carbon pool by folate
FFJ24_025650 (gcvP)
Enzymes [BR:
pek01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
FFJ24_025650 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QDW28039
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Position
6286080..6288956
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AA seq
958 aa
AA seq
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MSLNIHYKEDFQNRHIAPNEADTAEMLQTVGVNSIDELIEQTVPTAIRLKQPLNLPAAKS
ETEYLGALKQTSLLNKVFKSFIGQGYYDTITPGVILRNVFENPGWYTQYTPYQAEIAQGR
LQALLNFQTMVIDLTGMEIANASLLDEGTAAAEAMFMQYSLRKNQAAKKFFVSELVFPQT
IDILKTRANPYGIELVIGSHLDFTATEEFFGAIVQYPAGNGEVFDYAAFASALHSQNIKL
TVVADILSLTLLTPPGEWGADVVVGTTQRLGIPMGFGGPHAAFFATKEEYKRNIPGRIIG
VTIDSHGDYALRMALQTREQHIRRDKATSNICTAQALLAIMAGFYAAYHGPKGLKAIAER
THGLAISLASTLKGLGFEQLNSAYFDTIRFDLGDLKGGIHSGCIDHEINLNYVGNVATIS
FDETSTFEDVALIAKIFAKVKAIAADQVEVVENVETVIPAALQRTSAYLTHPIFNSHHSE
HEMLRYIKSLEAKDLSLCHSMIALGSCTMKLNATAEMIPVTWSHFGRIHPFAPADQVLGY
YSVFNELDKWLSEITGFAAMSLQPNAGAQGEYAGLMVIRAYHHDRGDFHRNVALIPASAH
GTNPASAAMADMKIVVVKSLENGNIDVEDLKAKAELHKDNLSCLMVTYPSTHGVFEESII
EICETIHANGGQVYMDGANMNAQVGLTSPANIGADVCHLNLHKTFCIPHGGGGPGMGPIG
VAKHLVPYLPGHAVVDIDKGKSISAVSSAPWGSASILIISHAYIAMMGADGLTNATKYAI
LNANYMKARLEQHYPVLYSGAQGRCAHEMILDCRSFKAFGIEVTDIAKRLMDYGFHAPTV
SFPVAGTLMVEPTESEPKHELDRFCDALIAIKNEITSVENGTLDKVDNPLKNAPHTVSVI
TANEWDHAYSRQTAAFPLSYVLERKFWPSVGRVNDSHGDRSLICACPPVESYLEEIVP
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaaatatccactacaaggaagattttcaaaatcgtcatattgcaccaaatgag
gcagatacagccgaaatgttgcaaactgttggcgtaaattctattgatgagctgattgaa
caaactgtcccgacggcaatcagattaaaacagccattaaatttgcctgcagcaaaatca
gaaactgaatatcttggtgctttaaaacaaacttcattgttgaataaagtttttaaaagc
tttatcggtcaaggttattatgataccattaccccgggtgtaattttacggaatgtattc
gaaaacccaggatggtacacacaatatacgccataccaggcagaaattgcacaaggccgt
ttacaggctttattaaatttccaaaccatggttatcgatttaaccggaatggaaattgcc
aatgcatctttattggatgaaggtactgctgccgctgaagcgatgtttatgcaatacagt
ttgcgtaaaaaccaggcagctaaaaaattcttcgtttcggaacttgtttttcctcagacg
atcgatattttaaaaacacgtgctaatccttatggtattgaactggttatcggaagtcat
ttagatttcactgctaccgaagaatttttcggtgcaattgttcaatatccggcaggaaac
ggtgaagttttcgattatgctgctttcgcatcggcattacacagccaaaatattaaatta
acggtggttgccgatattttaagcttaaccttattaacgcctccaggcgagtggggagct
gatgtggtagtaggtacaacacagcgtttgggtattccaatgggttttggcggaccacat
gctgcattttttgcaactaaagaagaatataaacgtaacatccctggccgtataatcggt
gtaaccatcgatagccatggcgattacgctttacgtatggctttgcaaacccgcgagcag
cacatccgtagagataaagccacttcaaacatctgtaccgcacaggcattattggccatt
atggctggattttatgctgcttaccatggtccgaaaggattaaaagccattgcagaacgt
acacacggtttggctatcagtttagcctctactttaaaaggtttaggttttgagcagtta
aattctgcttatttcgacaccattcgtttcgatttaggcgatttaaaaggcggtatccat
tcaggatgtatcgatcacgaaatcaacttaaactatgttggtaacgtagcaaccatttcg
ttcgacgaaaccagcactttcgaagatgtagctttaattgctaaaatctttgcaaaggtt
aaagctatcgcagcagatcaggttgaggtggtagaaaatgtagaaaccgttattccagcc
gctttacaacgtacttcggcttatttaacacatccaatttttaactcgcaccactcagaa
cacgagatgttgcgttatattaaatcattagaagcaaaagatttatcgctttgccactcg
atgattgctttgggtagctgtaccatgaaattaaatgcgacagcagagatgatcccggtt
acctggtctcatttcggtcgcatccacccgtttgcccctgccgatcaggtattgggttac
tattctgtttttaatgaactggataaatggttaagcgaaattactggttttgcagccatg
agtttacagccaaatgctggtgctcagggcgaatatgcaggtttaatggtcattcgtgct
tatcaccacgatagaggcgatttccaccgtaacgtggccctaattccagcttcggcacac
ggaacaaaccctgcttctgcggcaatggccgatatgaaaattgtggtggttaaatcttta
gaaaacggtaacattgatgtagaagatttaaaagctaaagccgaattacataaagacaac
ctatcgtgtttaatggtaacttatccatctacacacggcgtattcgaagaaagcattatc
gaaatctgcgaaaccattcacgctaacggcggacaggtttatatggatggtgcaaatatg
aatgcacaggttggtttaacaagtccggccaatattggtgccgatgtttgtcacttaaac
ttacacaaaactttctgtattcctcacggtggtggtggtccaggtatgggtccaattggt
gtggctaaacacctggttccttatcttccaggccatgctgtggttgatattgataaagga
aaatctatttctgcagtttcatctgcaccctggggctcggcttctatcctgatcatttct
cacgcttatattgcgatgatgggtgctgatggtttgaccaatgctaccaaatatgcgatt
ttaaacgcaaactacatgaaagcgcgtttagagcaacattatccggtactttattcaggt
gctcagggtcgttgcgcacacgagatgattttagattgccgttcgttcaaagctttcgga
atagaagtgactgacattgcaaaacgtttaatggattacggtttccacgcaccaacagtt
tcattcccagttgcgggtactttgatggttgagccaacagaatcagagcctaaacatgag
ttagaccgtttctgtgatgccttaattgcgattaaaaatgaaattacttcggttgaaaat
ggcactttagataaagtagataacccattaaaaaatgcgccacatacggtttcggtaatt
actgctaacgaatgggatcatgcttacagccgtcaaaccgctgcgttcccgctttcatat
gtgttagagcgtaagttctggccatcggttggtcgtgttaacgatagtcatggtgataga
tcattgatctgtgcatgccctcctgttgagagttatttggaagagatcgttccttag
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