Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00024
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Entry
SAR11G3_00024 CDS
T01465
Name
(GenBank) penicillin-binding protein 2 (PBP-2)
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Pathway
pel00550
Peptidoglycan biosynthesis
pel01100
Metabolic pathways
pel01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAR11G3_00024
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAR11G3_00024
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pel01011
]
SAR11G3_00024
Enzymes [BR:
pel01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SAR11G3_00024
Peptidoglycan biosynthesis and degradation proteins [BR:
pel01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SAR11G3_00024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AEA80499
UniProt:
F2I220
LinkDB
All DBs
Position
complement(20269..22104)
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AA seq
611 aa
AA seq
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MEYFIPSPKKGSESKAKVISRRAFALTSFKFVFLATIVSRLFYLQIIKRDEFIIKADKNR
FRKWKLTPSRGLILDKNNNIIADNFQVFKIAFIPREIRSIDNFLSSFSKILPITSNEISY
YKKKYRVHNKNLPFVLDKNLNWTAFSKLNYVIHNVQGAQPFMSYERTYIHPNEFAHILGY
VSTPNQKDLNQLDASYIDVPNLKVGKIGLEKNSNKSLLGTPGSAIYEVNAFGKRVKNIKK
IDGTNGSRIKTSIDKDIQIYAYQQLKEKSGSVVVMNMYGSVLCCVSSPSYDPNKFTYGIS
YKDYDVLKNNEKKPLVNKAMTTTYPPASTFKMIVALSALENKIITKNFKHTCKGKVDLYE
QRYHCWKDKGHGRVNLKRAIKESCDIYFYEVARLLGIDRLQKTAIKFGLGNYVFQNFFEE
ARGLVPSTLWKREALGKSWYLGETMISGIGQGYIKTTNVQLCKMIAQFANGGYQINASFL
DSGDLALGKKIIEDDEHIELILKSLFEATNHPGGTSYRSRIAGTMKLAGKTGTAQVRKIS
ESQREQDLKNKDLPWKFRDHSLFTGYGPANNPKYAISVVIEHGGSGSAVAAPIARNVMRK
IFEKERKLNNV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaatattttatcccaagcccaaaaaaaggatcagaaagcaaagctaaagttatatcc
agaagggcatttgcactaacctcatttaaatttgttttcctggcaacgattgtgtcccgt
ttattttatctccagattatcaaacgagatgaatttattatcaaagcagacaaaaacaga
tttagaaaatggaagttaacaccttcgcgaggcttaattcttgataaaaataataatatt
attgcagataattttcaagtttttaaaattgctttcattccaagggaaattagatccata
gataattttttatcatccttttctaaaatattaccaattactagtaatgaaatttcttat
tataaaaaaaaatatagagttcacaataaaaatttaccttttgttttagataaaaattta
aattggactgctttttcaaaattaaattatgttatccataatgtgcaaggtgcacaaccc
tttatgtcatacgaaagaacttacatacacccaaatgaatttgctcatattttaggatat
gtcagcacacctaaccaaaaagatctaaaccagttagatgcaagttatatagatgttcct
aatttaaaagttggaaaaattggattagaaaaaaattctaataaaagtcttttgggtacc
cccggatctgctatttatgaagtaaatgcatttggcaaaagagtaaaaaatataaaaaag
atagatggaactaatggaagtagaataaaaacttctattgataaagacattcaaatttat
gcttaccaacagctaaaagaaaaatcagggtctgtggttgtgatgaatatgtatggaagt
gttttgtgttgcgtctctagcccatcttacgacccgaataaatttacatatggaataagt
tataaagattatgatgtattaaaaaacaatgaaaagaaaccattggttaataaagccatg
acaaccacctatcctccagcatctacatttaaaatgatagtagctttatcagctctagag
aataaaattattactaaaaattttaaacatacctgcaaaggaaaagtagatctttatgag
cagagatatcattgttggaaagataaaggccatggacgtgtaaatttaaaaagagcaatt
aaagaatcgtgcgatatttatttttatgaagttgcaagattactaggaattgaccgcttg
caaaaaacagctattaaatttggattgggcaattatgtattccagaatttctttgaagaa
gcgagaggtctagttccatccacattatggaagagagaggctttgggtaaatcctggtat
ttgggagaaactatgatttctggaatagggcagggttatattaaaactactaatgttcag
ctttgtaaaatgattgcccaatttgccaatggtggctatcaaattaatgcaagtttttta
gattctggcgatttagctctgggaaaaaagattattgaggacgatgagcatattgagctt
attttaaagagtttatttgaagcaaccaatcatccaggtggaacatcttatcgctcaaga
atcgctggaacaatgaagcttgcaggaaaaacaggtacagcgcaggtcagaaaaatatca
gaatctcaaagagaacaagatttaaaaaacaaagacttgccctggaaattcagggatcat
tcattgtttactgggtacggtccagcgaataatcccaaatatgccatctcagttgttatt
gaacacggaggttcaggatctgcagttgctgcacctattgcaaggaatgtaatgagaaaa
atttttgaaaaagaaagaaaattaaacaatgtatag
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