Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00339
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Entry
SAR11G3_00339 CDS
T01465
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pel03016
]
SAR11G3_00339
Enzymes [BR:
pel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SAR11G3_00339
Transfer RNA biogenesis [BR:
pel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAR11G3_00339
Prokaryotic type
SAR11G3_00339
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEA80814
UniProt:
F2I047
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All DBs
Position
complement(308106..308984)
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AA seq
292 aa
AA seq
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MNGWINIYKPKGYTSTYCLNVLKSKFKLKKIGHAGTLDPLAEGVLPIAIGEATKSIPYLA
EAKKNYLFEVFWGEETNTLDSEGVTTNVSKIIPSLKEINKVLHLFIGQIDQVPPKFSAKK
INGKRCYDLARNNEEFELKPQKVTIFNLRVVSHHENKTSFLVSCGSGTYVRSLARDLAFA
LNTFGYASKILRSRYSHFSKKNTLTMDFLIKNVEKEDFYKYLLDIRKVLIHIPSIKLEDE
RIKLIKNGMKVSMLEEFGEVNIKSLIAQNQSQVLAFGELKSGFFYPKRILNI
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaatggttggatcaatatttacaaacctaaaggctacacttcaacttattgtttaaat
gttctcaaatcaaaatttaagttaaaaaagattggtcacgctggaacgctggatccatta
gcagaaggagttctaccaatagccattggtgaggcgacgaagtctattccttatctagcg
gaagcaaaaaaaaattatttgtttgaagttttttggggcgaagaaacaaacacactagat
tctgagggagtgactaccaatgtatctaaaattatcccttctctaaaagaaattaataaa
gtacttcatttatttattggacagattgatcaagtccctccaaaattttcagctaaaaaa
attaatggcaaaagatgttatgacttagcaagaaataatgaggaatttgagctaaagcca
caaaaagtaactatttttaatttgagagttgtctctcatcatgaaaacaaaacatcgttc
ttggttagttgtggatctggaacttatgtgagaagcttagctagagatttggcatttgct
ttaaatacttttggttatgcgtctaaaattttaagaagcagatatagtcatttctcaaaa
aaaaatacactgaccatggattttttaataaaaaacgttgaaaaagaggacttttataaa
tacttgcttgatattcgaaaggttttaatacatataccatccataaaattagaagatgaa
agaataaagcttattaaaaacggaatgaaagtaagcatgttggaagagtttggagaagta
aatattaagagtttaattgcccaaaatcaaagccaggtactcgcattcggagaattaaag
tctggatttttttatcccaaaagaattttaaatatataa
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