Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00417
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Entry
SAR11G3_00417 CDS
T01465
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pel03016
]
SAR11G3_00417
Transfer RNA biogenesis [BR:
pel03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SAR11G3_00417
Prokaryotic type
Methyltransferases
SAR11G3_00417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
Dynamin_N
FeoB_N
AAA_24
ABC_tran
AAA_28
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AEA80892
UniProt:
F2I2Y7
LinkDB
All DBs
Position
374627..375967
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AA seq
446 aa
AA seq
DB search
MTIYALSTPPGVSGIAIIRLSGPNSLTITKDIIHGTIDKPRMALLKTFYDSKKEIIDEGI
VVWYPKGQSYTGDDLIEFHVHGSKAVINKFLNELSLRSDCQLAEAGEFTKQAFLNNKINL
YEAESIADLLNAETEGQRIQALRLKNSSPLFMKWREQILDVRSKCEAAIDFSEEDLPASI
LEGNVQKIKEISQEITVMLDDSKVGEIMREGFKIAIFGPPNSGKSSFLNLLAKRKAAIVS
EIKGTTRDVIEVQLQIKNFPVVLSDTAGIRAAKNKIEKIGIALALKQITKSNLNILILDG
TIKTISNEIKKLINEKTLIIINKQDKKNFDGRLVLKNIKGKKFLGIHKISTLTKFGYKKL
IEDLKNILNSLHDHGDDTLISRSRHRTLLSKTSKHLKNYLKISQSAEIEKTAEELKIASN
YLSEIVGFIGVEEVLGRIFKDFCVGK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacaatttatgcactatcaactccaccaggagtttctggaattgccatcattcgcttg
tctggaccaaactctctaacaatcactaaagatataattcatggcacaattgataaacca
agaatggctttgctcaaaaccttttacgattcaaaaaaagaaattatagatgaaggaatt
gttgtttggtatcccaaaggacagagttatacgggagatgatctaatagagtttcatgtt
catggtagcaaagctgttatcaataaatttttaaatgagctgtcattacggtctgattgt
caacttgcagaagctggagaatttactaaacaggcatttttaaataataaaattaattta
tacgaagctgaaagtattgcggaccttttaaatgctgaaacagaaggacaaagaattcag
gctttgagattaaaaaatagctcacctttatttatgaaatggagagaacaaattctagac
gttagaagcaagtgtgaagctgccattgatttctccgaagaagatcttcctgctagtatt
ctggaaggaaatgttcaaaaaataaaggaaatttctcaagaaatcactgtaatgctagat
gatagcaaagtaggggagatcatgagagaaggctttaaaatagctatttttggacctcct
aactcagggaaatcaagctttttgaacttattagccaaaagaaaagcggctattgtctcc
gaaatcaaaggaacaactagagacgttatagaagttcaactacaaattaaaaacttccct
gttgtgctgtcagacacggcaggcataagagctgcaaaaaacaaaattgaaaaaatagga
attgctctggctcttaaacaaattacaaaatcaaatttaaatattttaatattagatgga
acaattaaaacaatatcaaatgaaataaaaaaattaattaatgaaaaaactttaataatt
attaataagcaagataaaaaaaactttgatggaaggcttgttttaaaaaacataaaggga
aaaaagtttttaggaattcacaaaatttctactttaacaaaatttggctacaaaaagtta
attgaagatctaaaaaatattttgaatagtttacatgatcatggtgatgatacgctaata
tcaaggtctaggcacagaactttactaagcaaaacgtctaaacatttgaagaactacctt
aaaatctctcaatctgcagaaatagaaaaaacagctgaagagctgaaaatagcctcaaac
tacttaagcgaaatagtaggttttataggagtagaagaggtgcttggaagaatctttaaa
gatttttgtgttgggaaataa
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