KEGG   Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00463
Entry
SAR11G3_00463     CDS       T01465                                 
Name
(GenBank) signal recognition particle, subunit Ffh SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pel  Candidatus Pelagibacter sp. IMCC9063
Pathway
pel02024  Quorum sensing
pel03060  Protein export
pel03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    SAR11G3_00463
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SAR11G3_00463
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SAR11G3_00463
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pel02044]
    SAR11G3_00463
Enzymes [BR:pel01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     SAR11G3_00463
Secretion system [BR:pel02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   SAR11G3_00463
  Eukaryotic Sec-SRP protein
   SAR11G3_00463
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA AAA_17 Zeta_toxin AAA_22 AAA_33 6PF2K AAA_18 AAA_26 AAA_19 ResIII G-alpha AAA_31 ParA AAA_28 DnaB_C AAA_30 nSTAND3 AAA_16 KTI12 ATP_bind_1 AAA_14 APS_kinase AAA_24 Thymidylate_kin KAP_NTPase AAA_7 Arf 7kD_DNA_binding NACHT SWI2_SNF2 RNA_helicase ArsA_ATPase Mitoc_mL59
Other DBs
NCBI-ProteinID: AEA80939
UniProt: F2I3H1
LinkDB
Position
416023..417168
AA seq 381 aa
MIVKIVFDELVKVLGDEKKELNLKAVPPIKILVVGLQGSGKTTTSAKLAKYLEKQYSKKS
MLVSLDIYRPAAQRQLEVLGNSNSIKTLPIMDGQFPLEISKRAINAASLSGEDVIIFDTA
GRTQIDQQMMMELKQLENDIQPSEIILVADSLTGQDAVNIASEFKKTVSLSSIILTRIDG
DGKGGAALSMKSTTGCPIKFLGTGEGIDEMEVFHPDRIANRILGMGDVVSLVEKVSEGLE
KEKIEELEENFKKGSFTFSDYLKQIQQMKKAGGMSGVLSMLPGVSKIKKQMEDSDLDESL
LAKQEAIILSMTEKERDNPRVIDGSRKKRIANGSGTDISMVNKLLKQHKMMTTMMKKMSK
GGRGALEGMDNVPPELFNNLK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgatcgtcaaaatagtttttgatgaattggtaaaagttcttggagacgaaaaaaaagaa
cttaatttaaaagcagtgcccccaattaaaattctagtagttggtttgcaagggtctgga
aaaaccacgacatctgcaaagttagctaaatatttagaaaaacagtattcaaaaaaaagt
atgttagtaagtttggatatttaccgaccagcagcacaaagacagctggaggtactcgga
aatagcaattctattaaaacacttccaataatggacggacagtttcctctagaaatatct
aaaagagctattaatgcagcctctctatccggagaagatgtaatcatttttgatactgca
ggtagaactcaaatcgatcaacaaatgatgatggagttaaaacaattagaaaacgatatt
cagccaagtgaaattatattagtggccgactctttaacaggtcaagatgcagtcaatatt
gcttctgagtttaaaaaaactgtctccctaagttcaattatattgaccagaattgatgga
gatggaaaaggtggtgctgcattaagtatgaaatcaacaaccggatgtccaataaaattt
cttggaactggagagggtattgatgaaatggaagtgtttcatccagatagaatagccaat
cgaattttgggtatgggggatgttgtttcccttgtagaaaaagtttcagagggattggaa
aaagaaaaaatcgaagaacttgaagaaaattttaaaaaaggatcttttacttttagtgac
tacctaaaacaaattcaacaaatgaaaaaagcagggggtatgagtggggtattgagtatg
ttgcccggtgtttctaaaattaaaaaacaaatggaagactctgatctggatgaaagtttg
cttgcaaaacaagaagctattattttatctatgacagaaaaggaaagagataacccaaga
gttatagatggttcaagaaaaaaaagaattgcaaatggatctggcacagacatttcaatg
gtaaataagcttctaaagcaacataaaatgatgacaactatgatgaaaaaaatgtcaaaa
ggcggaagaggtgctcttgagggaatggataatgttcctcctgagttattcaataatcta
aaatag

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