Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00591
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Entry
SAR11G3_00591 CDS
T01465
Name
(GenBank) integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pel03032
]
SAR11G3_00591
03036 Chromosome and associated proteins [BR:
pel03036
]
SAR11G3_00591
03400 DNA repair and recombination proteins [BR:
pel03400
]
SAR11G3_00591
DNA replication proteins [BR:
pel03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SAR11G3_00591
Chromosome and associated proteins [BR:
pel03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SAR11G3_00591
DNA repair and recombination proteins [BR:
pel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SAR11G3_00591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
mTERF
HU-CCDC81_euk_1
Cac1_C
Motif
Other DBs
NCBI-ProteinID:
AEA81066
LinkDB
All DBs
Position
complement(520806..521111)
Genome browser
AA seq
101 aa
AA seq
DB search
MEKKTFVKKELIQELQSKYPKILNADIEKTVEGIFKYLSNQLASGHNVEIRGFGMLKTKA
TKPRTARNPKSGESVEVPAKRKISWKSSKLLNININEEINN
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaagacttttgttaaaaaagaactcattcaagagttacaatctaaatatcca
aaaattttaaacgctgatatagaaaaaactgtagaagggatttttaaatatctgtccaat
caattagcttctgggcacaatgttgaaataagaggttttggaatgttaaaaactaaagct
acaaagccaaggacagcacgtaatcctaaatctggagaatctgttgaagtccctgctaaa
cgaaagataagttggaaaagctccaagctattaaacattaatatcaacgaagagattaat
aattga
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