Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00652
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Entry
SAR11G3_00652 CDS
T01465
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pel03009
]
SAR11G3_00652
Enzymes [BR:
pel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SAR11G3_00652
Ribosome biogenesis [BR:
pel03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SAR11G3_00652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AEA81127
UniProt:
F2I0C2
LinkDB
All DBs
Position
complement(579390..580130)
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AA seq
246 aa
AA seq
DB search
MKKELPEKVRISKFLASYNVGSRREIERMIENGRIYLNGEILTTPVHFVNKTDSIKLDGK
LLLFKKFKQIYKFYKPTDCICSKNKQDERKIVYDLLPKRFKNFIFAGRLDVNSEGLLIVT
NDGEVARSLELPKNKFVRKYRVRVYGVCEEQKIDNLSKGRKIDGIQYRPFNYKLFNKDKK
NFWIEMELKEGKNREIRELMRSIDLRVNKLTRLEFGPFKISNLKPGEIKTAEPKEIRQYE
DYLRKI
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaattacctgaaaaagttagaatttcaaaatttttagcatcttacaatgta
ggatctagaagagaaatcgaacgaatgattgaaaatgggagaatttacttaaacggagag
attcttaccacacctgttcattttgtgaataagactgattctataaagttagatggtaaa
ttgttgcttttcaaaaaattcaaacaaatttataaattttacaaaccaactgattgtatc
tgttctaagaataaacaagatgagagaaaaattgtttacgatctccttccaaaaagattt
aaaaattttatttttgcgggtagattggatgtaaactctgaaggactgctgattgttacc
aatgatggagaggtggcaagaagtctggagctgccgaaaaataaatttgtaagaaaatat
agagtacgagtctatggagtttgtgaagagcaaaaaattgacaatttgagcaaaggaaga
aagattgatggaattcaatatagaccatttaattataagctatttaacaaagataaaaaa
aatttctggatagaaatggaactaaaggagggaaaaaatagagaaataagagaattgatg
cggagtattgatttgcgagtaaacaaacttaccagattagagtttggaccttttaaaatt
tccaacttaaaacctggtgaaataaaaacagctgaacctaaagaaataagacaatatgag
gattatctccggaaaatttaa
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