Candidatus Pelagibacter sp. IMCC9063: SAR11G3_01031
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Entry
SAR11G3_01031 CDS
T01465
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Pathway
pel03030
DNA replication
pel03430
Mismatch repair
pel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAR11G3_01031
03430 Mismatch repair
SAR11G3_01031
03440 Homologous recombination
SAR11G3_01031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pel03032
]
SAR11G3_01031
03400 DNA repair and recombination proteins [BR:
pel03400
]
SAR11G3_01031
Enzymes [BR:
pel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAR11G3_01031
DNA replication proteins [BR:
pel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAR11G3_01031
DNA repair and recombination proteins [BR:
pel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAR11G3_01031
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AEA81506
LinkDB
All DBs
Position
912089..915511
Genome browser
AA seq
1140 aa
AA seq
DB search
MPENNYFNHFKVHTQYSICEGALKIVDLAVHCTSNNVASVGISDSFNMCGVLEFSQEISK
AGCQPIIGTQINFSFSENNLEKMGKISLVAKNDTGYKNLLKLSSSSYLSIEKNEDPHCDI
QELIDNSDGLIVLVGASHSLLSSLVLENNILDSELLLQKIQKFFEGNLYIEIQRHNEPHE
QALETQLLYFSEKFSIPIIATHEVFYLKKDMYEAHDAYICVGQKTYVNDIKRLRYSEEHY
FKSDYEMSELFLDLPEALENNKNLALRCSYRPLTSKPMLPNFNTESSNVNDELKINANKG
LEDRLKNFILINIADEDQRLATKQVYKERLNYEIEMISKMKFSGYFLIVSDYIKWAKSNN
IPVGPGRGSGAGSLVAWCLSITDLDPIKFGLIFERFLNPDRISMPDFDIDFCQEDRDKVI
NYVKDKYKNKVAQIITFGKLQARMALRDIGRVIGLPYGRVDQLSKMIPFDPSRPLTLAES
VAMEPRLQEAQKEDPTIEKLINLALKLEGLFRNIATHAAGIVIGDKNLTEIVPLYKDHDS
SIPIPVTQFDMNWSEQAGLVKFDFLGLKTLTVIKKTIELIEKDSQKLDIEKIPLDDSKTF
ELLSSGETMGIFQLESAGMREVLKQMIPNKFEDIIALVALYRPGPMQNIPSYNNRKHGLE
EPDYLHPKIENILKETYGVIIYQEQVMQIAQALSGFSAGKADILRKAMGKKKSAEMDRQK
KDFIEGAIKNDIPKEQAVYIFQLVEKFAQYGFNKSHAAAYALIAYQTAYLKTHYPLSFFS
ASMSMEMSNTDKLNQFYEELKRLSIKVHNPCINHCFADFVPKDGTIFYALSGIKAVGFEA
ISNVIKEREENGKFLSMEDFLKRVSSKDINKLQLEGLIKAGAFDCIDKNRSKLYENVPEI
IKQSKSYDENLQVDQINLFESQTNDNFKINFTVHPAWDEPEKIKREFESIGFFVSEHPLK
NYKHILDNYSVVQFQSFSDNKNINECMLSGTVMAIQEKKTAKGMPFAIVKFSDLSRMFEF
FIFSEVLVTNREKLSAGKSFLINVKREVLKSGIERTNVTKIFLINDISEKKIDNLDVTIN
KLDDIGSLKNQLSKNGKTAVSLSHVDNGKKMIFNLKNKRTVTLESVKTIENEGFLTKINN
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaataattattttaatcactttaaagttcatactcagtattcaatatgcgaa
ggtgctttaaaaattgttgatctagcagtgcattgtacatctaataatgttgcttcagtc
ggtatttctgattctttcaatatgtgtggtgttttagaattttcgcaagaaatttcaaaa
gcaggatgccagcctattattggcactcaaataaacttttctttttcagaaaataatctt
gagaagatgggtaaaatttctcttgttgctaaaaatgacactggttataaaaatttatta
aaactttcttcaagctcttacctatccatagaaaaaaatgaagaccctcattgcgatatt
caagaattaattgacaattctgatggtttaatagttttagtgggagccagccactcttta
ttatcttccctggtactagaaaacaatattttagattctgaacttcttcttcaaaagatt
caaaaattttttgaaggaaatctttatatcgaaatacaaagacataatgaacctcatgag
caagctttagaaactcaacttctttattttagtgaaaaattttccattccaataatagct
acgcacgaagttttttatttaaaaaaagacatgtatgaagctcacgacgcttacatttgt
gttggtcaaaaaacttacgtaaatgatatcaagcgtcttagatattcagaagagcattat
tttaagtcagattatgaaatgagcgagctttttttggatttaccagaagccttagaaaac
aacaagaacctagccttgagatgtagctatagacccttgactagtaagccgatgttgcca
aattttaatacagaatcttccaatgttaatgacgaactaaaaattaatgcaaacaaaggt
ctggaagataggcttaagaattttattttaattaatatagctgatgaagatcaaagacta
gcaaccaaacaggtatataaagaaaggctaaattatgaaattgagatgatttctaaaatg
aaattttcaggatattttttaattgtatcagattatattaaatgggctaaaagtaataat
attcctgtaggaccaggaagaggatctggtgcaggatcattagttgcctggtgcttatcc
ataacagaccttgatcctattaagttcggtttgatttttgaacgatttctaaatccagat
agaatttcaatgccagattttgatatagatttttgccaagaagatcgtgataaagttatt
aattacgttaaagacaaatacaaaaacaaggttgcgcaaataattacttttggaaaactt
caggctagaatggctttgcgtgatattggtagagttataggtttgccgtatggacgcgta
gatcaattatctaaaatgattccctttgatccttcaagacccttaacgctagcagaatct
gttgctatggaaccaagacttcaagaagctcaaaaagaggatccgacaatcgaaaaactt
atcaatctagctttgaagttagaaggtttatttagaaatattgcaactcatgctgcagga
attgtaattggtgataaaaatttaacagaaatagttccattgtacaaagatcatgattca
agcattcctattcccgttacccaatttgatatgaactggtctgagcaagcgggattagta
aaatttgattttctaggattaaaaacacttacagttattaaaaaaacaattgagttaata
gaaaaagatagtcaaaagctagatatagaaaaaattcctttagatgatagcaaaacattt
gaactcctcagttcaggagagacaatgggaatttttcagttggaaagcgccggcatgagg
gaagttttaaaacaaatgatacctaataagtttgaagatattatagcattagtagctttg
tatagacctggccctatgcaaaatattccctcatataataatcgaaaacatggacttgaa
gagcctgattatcttcaccctaaaattgaaaacatattaaaagaaacttatggtgtgatt
atctatcaagaacaagttatgcaaattgctcaagctttatcaggtttttcagcaggaaaa
gcagatattttaagaaaagcaatgggtaagaaaaaatcagctgaaatggataggcaaaaa
aaagatttcattgaaggcgctattaaaaatgacattccaaaagagcaggctgtttatata
tttcagttagtggagaaatttgctcagtacggatttaacaaaagtcatgcagctgcctat
gctttaatagcttatcaaacagcttatttgaagactcattatccattaagttttttttca
gcatctatgagtatggagatgtccaatactgataagctaaatcagttttatgaagagtta
aaaagactttctataaaagtacataacccatgtatcaatcattgttttgcagattttgtc
ccaaaggatggtacaattttttatgcactatcgggaattaaagccgtaggatttgaggca
atatctaatgttatcaaagagagagaggagaatggaaagtttttatctatggaggatttt
cttaagagggtaagtagcaaagatataaacaagctgcaactcgaaggccttattaaagcc
ggtgcatttgactgcatagataaaaatcgtagtaaactttatgaaaatgtccctgaaatt
attaagcaatcaaaaagttacgatgaaaaccttcaggtagatcaaataaatctatttgaa
tctcagacaaatgacaatttcaaaattaactttactgtacatccagcatgggatgagcct
gaaaaaattaaaagggaatttgaatctattggtttttttgtaagtgaacatccattaaaa
aactataaacacattttagataattacagtgttgttcaatttcagagtttttcagataat
aaaaatattaatgaatgcatgttgtcaggcacagttatggctatacaggaaaaaaaaact
gcaaagggtatgccttttgcaatagttaagtttagtgacctaagtagaatgtttgagttt
tttattttttcagaagtgttggttaccaatagagaaaagttatctgcaggaaagtctttt
ttaataaatgttaaaagagaagtgctcaaaagcggaattgaaagaacaaatgttacaaaa
atttttttaattaatgatatttctgaaaagaaaatagacaatctcgatgttacaattaat
aagttggatgatattggaagtttaaaaaatcagctttccaaaaacggaaaaacagcagta
tccttatctcatgttgataatggtaaaaaaatgatttttaaccttaaaaacaaaagaact
gttactctagaatcggtcaaaaccattgaaaatgaaggttttttaacaaaaattaataat
taa
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