Candidatus Pelagibacter sp. IMCC9063: SAR11G3_01158
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Entry
SAR11G3_01158 CDS
T01465
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Pathway
pel00260
Glycine, serine and threonine metabolism
pel00630
Glyoxylate and dicarboxylate metabolism
pel00670
One carbon pool by folate
pel00680
Methane metabolism
pel01100
Metabolic pathways
pel01110
Biosynthesis of secondary metabolites
pel01120
Microbial metabolism in diverse environments
pel01200
Carbon metabolism
pel01230
Biosynthesis of amino acids
pel01240
Biosynthesis of cofactors
pel04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAR11G3_01158
09102 Energy metabolism
00680 Methane metabolism
SAR11G3_01158
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAR11G3_01158
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SAR11G3_01158
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SAR11G3_01158
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SAR11G3_01158
Enzymes [BR:
pel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SAR11G3_01158
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AEA81633
UniProt:
F2I1B9
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All DBs
Position
complement(1027618..1028904)
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AA seq
428 aa
AA seq
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MSKNNSRINKFFKSSVKESDPDLHSSIVKELDRQRSHLELIASENIVSKAILDVQGSVLT
NKYAEGYPGKRYYGGCEFVDIAEDLAIERVTKLFNVKFANVQPHSGAQANGAVFLALLNP
GDTILGMGIDQGGHLTHGAPPAQSGKWFNAISYGVTKETGLIDYNSVLSLAKKHKPKLII
AGGSAYSRIINFKKFREAADEVGAKLLVDMAHFSGLVAGQVYPNPCDFADVVTSTTHKVL
RGPRGGIILTNSEELAKKFNSAVFPGLQGGPLMHVIAAKAVCFKEALSDDFKLYAKDVVE
NARILSKTLSDLGLTIFSGGTDTHLVLVDLRPFGLTGKEAEISLGRAHLTCNKNGIPFDE
QKPWITSGIRLGTPACTTRGLGLAEFKLIGEYINEVLQGLKNNKDDNSVVEKDVAQKVKD
LCNNFPIY
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaataattctaggataaataaattttttaaatcaagtgtaaaagaatctgac
ccagatttgcattcctctattgttaaagagcttgataggcaaagatctcacttggagtta
attgcatcagaaaatattgtatctaaagctatactagatgttcaagggtcagtattaacc
aataaatacgcagaaggttatccaggaaagagatattatggcggttgtgaattcgttgat
attgctgaggacttagctattgaaagagtaacaaaattatttaatgtaaaatttgcaaat
gttcagccacattctggagctcaagcgaatggtgctgtttttttagccttacttaatcca
ggcgatactattttagggatgggtattgatcaaggtggccacttaactcatggagctcct
ccagcacaatctggaaaatggtttaacgcaatttcttatggagttaccaaagaaacaggc
ttgattgattataattctgttttgtctttagctaaaaaacataaaccaaaattaattatt
gcaggtggtagcgcgtattcaagaataattaattttaaaaaatttagagaagccgctgat
gaagttggtgctaagttattggtagacatggctcacttttctgggctcgttgctggccaa
gtatatcccaacccatgtgattttgcagatgtcgtaacttctaccacgcacaaagtatta
cgaggaccaaggggcggtatcattttgactaacagtgaagagcttgcaaaaaaatttaat
tcagcggtatttccaggtttacaaggtgggcctttaatgcacgttatcgcagctaaggct
gtttgttttaaagaagctttatctgacgattttaaattatacgctaaagatgttgttgag
aacgccaggatattatcaaaaacacttagtgacttgggcctaactattttttctggcggt
acagacacacatttagttttggttgatttgagaccatttggtcttacaggaaaagaggct
gaaatatcattaggtagggctcacttaacttgtaataaaaatggaataccttttgatgaa
caaaaaccttggatcacctccggtattagattgggaacacccgcttgtacaactagaggg
cttggtttagctgaatttaagttaatcggagaatacattaatgaagttttgcaaggactt
aaaaataacaaagatgacaacagcgttgttgaaaaagatgttgcacaaaaagtaaaagat
ctttgtaataactttccaatttattaa
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