Candidatus Pelagibacter sp. IMCC9063: SAR11G3_01377
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Entry
SAR11G3_01377 CDS
T01465
Name
(GenBank) protein-like deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pel03400
]
SAR11G3_01377
Enzymes [BR:
pel01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
SAR11G3_01377
DNA repair and recombination proteins [BR:
pel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
SAR11G3_01377
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AEA81852
UniProt:
F2I1Y8
LinkDB
All DBs
Position
complement(1222003..1223412)
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AA seq
469 aa
AA seq
DB search
MAEDYGLCTYEKHHKQKILLFLSAMRSYAEELSAAKYQVTYYDCNHPLFKKSYETKLLEF
IKKNSIKEMVSFEVEDKFLEQRLHSFFLKNKVSYQTIKSPMFVTTRKDFTDYLQSNKKPF
MATFYKLQRTKMNVLIQDKNKPVGGKWSFDEENRKKLPKVITIPKVQSFKMSEHTKKLKP
FIEKNFSSHPGILDSFNHPTTRKDAIKLYLNFLKEKFALFGDYEDSMTVKSHTVFHSMLS
PIINLGLITPATLIRETLDFAKANKIPLNSLEGYVRQIIGWREFMRGIYQNYEKRLLNTN
FFNHQRKLSKSWYDGTTGIVPLDHAIKNCLQFGYTHHIERLMVVCNLMNLSGIQPVQVYK
WFMEMYVDSSDWVMAPNVMGMGLFSDGGIFATKPYICGSSYILKMSDYPKGEWCEVMDGL
YWKFIQDHKDFFLKNYRLAMMAKLLEKMDSVRKKRIFSKADEFIHQNTN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggattacggcctttgcacttatgaaaagcatcataaacaaaaaattttactt
tttttatctgccatgcgttcttatgcagaggaattatctgccgctaagtaccaagttact
tattacgattgtaatcaccctttatttaaaaaaagctatgaaaccaaactattagaattt
attaaaaaaaattctattaaagaaatggttagctttgaagtagaagataagtttttagaa
cagagattacattctttttttttaaaaaataaagtttcgtaccaaaccattaaatcacct
atgtttgttacaactagaaaagatttcacagattatttacaaagcaataagaagccgttc
atggcaactttttataaattgcaaagaacaaaaatgaatgtgctcatccaagataaaaat
aaaccagtagggggtaagtggtcatttgacgaagaaaatagaaaaaaattacccaaagtt
ataaccatacctaaagttcaatcttttaagatgtctgagcatacaaaaaaattaaaacct
ttcattgagaaaaatttttcttcacaccctggtatcttagattcttttaatcatcccact
accagaaaagatgccattaaattatatcttaattttttaaaagagaaatttgcactattt
ggcgattatgaagattcgatgactgtaaagtcacacactgtatttcacagcatgttaagt
ccgattattaatttagggctaattactcctgccaccctgattagggaaactttagatttt
gccaaagcaaataaaattccattaaactcattggagggatatgtcaggcaaataattggc
tggagagaatttatgagaggaatttatcaaaattacgaaaagcgtttgttaaatactaat
ttttttaatcatcaaagaaaattaagcaagagttggtatgatggaactacgggcattgtt
cctttggatcatgctattaaaaactgtttgcagtttggatatactcatcacatagaacga
ttgatggttgtttgtaatttaatgaatttatcaggaatacaacccgtgcaagtatacaaa
tggtttatggaaatgtatgtggattcttctgactgggtcatggcacccaatgttatgggt
atggggctatttagtgatggaggtatctttgcaaccaagccttatatttgcggatctagc
tatattttaaaaatgagcgactatcctaaaggagagtggtgtgaggtgatggatgggttg
tattggaagtttattcaagaccacaaggatttctttttaaaaaactacagattagccatg
atggcaaaacttttagaaaaaatggatagcgtaagaaaaaaaagaatattttctaaagca
gatgagtttattcatcaaaatactaattaa
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