Candidatus Pelagibacter sp. IMCC9063: SAR11G3_01404
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Entry
SAR11G3_01404 CDS
T01465
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Pathway
pel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SAR11G3_01404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pel03400
]
SAR11G3_01404
Enzymes [BR:
pel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SAR11G3_01404
DNA repair and recombination proteins [BR:
pel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SAR11G3_01404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
YscO
Spore_III_AF
HU-CCDC81_bac_2
Herpes_BLRF2
EF-hand_5
Ribosomal_L22
EF-hand_1
ERM_helical
MYO6_lever
MTR4_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
AEA81879
UniProt:
F2I339
LinkDB
All DBs
Position
complement(1247297..1247548)
Genome browser
AA seq
83 aa
AA seq
DB search
MKKNNIPADIEKLSFEQALEQLEQIVSKLEDGSAKLEESIDEYTRGIQLKKQCEAKLKEA
TMKVEQISIDKDGKISKKDFVRE
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacaatattccagctgatatagaaaagctatcctttgaacaagcactagag
caattagagcaaattgtatcaaaattagaggatggaagtgccaaattagaagaatcgatt
gatgagtacactaggggcattcagttaaaaaaacaatgtgaagccaaacttaaagaagct
acgatgaaagtcgagcaaatttccatcgacaaggatggcaaaataagcaaaaaagatttt
gtaagagagtag
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