Candidatus Pelagibacter sp. IMCC9063: SAR11G3_01410
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Entry
SAR11G3_01410 CDS
T01465
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pel03021
]
SAR11G3_01410
Transcription machinery [BR:
pel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAR11G3_01410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AEA81885
UniProt:
F2I345
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All DBs
Position
1252451..1253353
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AA seq
300 aa
AA seq
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MNQNLTKTNLPTLTPEGSFSSYLSKIRKFPMLDAAEEYVLAKNWREQGDKDAAHKLVTSH
LRLVAKIAMGYRGYGLPVSELVSEGNIGLMQAVRKFDPEKGFRLATYAMWWIKASIQEYV
LRSWSLVKIGTTSAQKKLFFNLKKIKNQIFAAEQGNMLPEHITEIATQLDVREDEVVSMN
QRLAGHEHSLNAPVGGEDSDAEWQDWVVDENADQELQISQKQELNQRQSLLKNALHVLDE
REKEILHNRRLIDEPKTLEELSQKHKVSRERIRQIENRAFEKVQKAMLENIKQPKQLSVN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaacctgaccaaaactaacttaccaactcttacacctgagggaagtttttcc
tcttatctttctaagatcagaaaatttcctatgttagatgcggcagaagaatacgtgctt
gctaaaaactggagagagcaaggagacaaagatgcagctcacaagttagtgactagtcat
ttgcgattggttgcaaagattgccatgggttaccgcggttatggattaccagttagtgaa
ttagtatctgagggaaatattggattgatgcaagcagtaagaaaattcgatcctgagaaa
gggtttcgacttgcaacgtatgctatgtggtggattaaagcttctattcaagaatatgta
ttacgctcttggagtttagttaaaatcggaacaacatcagctcaaaaaaaactatttttt
aatttaaaaaaaattaaaaatcaaatttttgctgcagaacagggcaatatgttgccagaa
catattactgaaattgccacacagttggacgttagagaagatgaagtggtatcaatgaat
caaagattagcaggccatgagcattcattaaatgcacctgtgggtggtgaagatagcgat
gcagaatggcaagactgggtggttgatgaaaatgcagatcaggaactacaaatttcacaa
aagcaggaactcaatcaaagacaatctctcttaaaaaatgcattacacgtattggatgag
agagaaaaagaaattttacataaccgcagacttattgatgagcccaaaacattagaagaa
ctaagccaaaaacacaaagtaagtagagaacgaattcgtcaaattgaaaatagagctttt
gagaaagtgcaaaaagcgatgctagaaaatatcaaacaacctaagcaactatctgttaat
tag
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