KEGG   Candidatus Pelagibacter sp. RS39: B5L73_00015
Entry
B5L73_00015       CDS       T11425                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pela  Candidatus Pelagibacter sp. RS39
Pathway
pela00300  Lysine biosynthesis
pela00470  D-Amino acid metabolism
pela01100  Metabolic pathways
pela01110  Biosynthesis of secondary metabolites
pela01120  Microbial metabolism in diverse environments
pela01230  Biosynthesis of amino acids
Module
pela_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pela00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    B5L73_00015
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    B5L73_00015
Enzymes [BR:pela01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     B5L73_00015
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: ARJ47216
LinkDB
Position
1975..2799
AA seq 274 aa
MDIKAFKMDGLGNDFVIIDNREKIINLTKDQMVKICDRNFIGCDQLIFIEPDSSADASLR
FFNSDGGESGACGNGTRCVANLISNEKNNKLIILNTLSGKLKSEILEKKIVTTEIGKAKL
KWNEIPLSKEIDTKNLNIKIIDKNNNEYSGGTAINVGNPHIVFFVKTIEDFDIEKIGPEI
ENHKIFPEKCNVTIAQIVNKNLIKVKVWERGAGLTKACGTAACATAYAGKLNNLTENKTD
IEFASGKLSISIDENNSIHMKGPVSDIKEIQIKL
NT seq 825 nt   +upstreamnt  +downstreamnt
atggacatcaaagcttttaaaatggacggattgggtaatgattttgtgattatcgataat
agagaaaaaattatcaatttgacgaaagatcagatggttaaaatttgtgacagaaatttt
attggctgtgatcaactaatatttattgaaccagatagttctgcagatgcaagtttaaga
ttctttaattcagatggaggtgagtctggggcatgtggaaatggaactagatgtgttgca
aatttgatttcaaatgaaaaaaataacaaattaataattttaaatacgctatctggaaaa
ttaaaatctgaaattttagaaaaaaaaattgttacaacagaaattggtaaagcaaagtta
aaatggaacgaaatacctttatcaaaagaaatagatacaaagaacttaaatatcaaaatt
attgataaaaataataatgagtactcaggtggcactgcaattaatgtgggtaacccacat
atagttttttttgttaaaacgattgaagattttgatatagaaaaaattggccctgagata
gaaaatcacaaaatcttcccagagaaatgtaacgtaacaattgctcaaattgttaataaa
aatttgatcaaagtaaaagtttgggaaagaggagctggtcttactaaagcttgcggaact
gcagcgtgtgctacagcatatgcaggtaagttaaataatcttacagaaaataaaactgat
atagagtttgcatctggaaaattatcaatttcaatagatgaaaataattctattcacatg
aaaggacctgtttccgatattaaagaaatacagataaaattgtaa

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