Candidatus Pelagibacter sp. RS39: B5L73_00400
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Entry
B5L73_00400 CDS
T11425
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pela Candidatus Pelagibacter sp. RS39
Pathway
pela03030
DNA replication
pela03430
Mismatch repair
pela03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B5L73_00400
03430 Mismatch repair
B5L73_00400
03440 Homologous recombination
B5L73_00400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pela03032
]
B5L73_00400
03400 DNA repair and recombination proteins [BR:
pela03400
]
B5L73_00400
Enzymes [BR:
pela01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B5L73_00400
DNA replication proteins [BR:
pela03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B5L73_00400
DNA repair and recombination proteins [BR:
pela03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B5L73_00400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ARJ47291
LinkDB
All DBs
Position
complement(63418..64080)
Genome browser
AA seq
220 aa
AA seq
DB search
MREIVLDTETTGISVKEGHRIVEIGCIELDNLIPTKNKFHCYLNPERKVSEKAFEVHGYS
DSFLSDKMKFKEVADDFLKFIKDKRLIIHNAEFDLSHLNNELKILGKEKIDNEIVDTLLL
ARNKFPGSQISLDALCKRYRIDNSKRVQHTALIDCDLLAKVYINLIDQKEPTLDFKNKEE
EVSKLNTEKVIYSKKVIKPSPEELKNHQIYLKTSLKKNFY
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagggagattgttttagacacagagacaactggtatttcagttaaagagggacacagg
attgtagaaatcggatgtattgaattagataatttaataccaacaaaaaataagtttcac
tgctacttaaatccagaaagaaaagtttctgaaaaagcttttgaagtacatggatactca
gatagttttttatctgataaaatgaaatttaaagaagtagctgatgattttcttaaattt
attaaagataaaagattgataattcataacgcagaatttgatttatctcatttaaataat
gaacttaaaattcttggaaaagaaaaaattgataatgagatagtagacacgctattgtta
gctagaaataaatttccaggctcccaaattagtttggatgctttatgtaaaagatatagg
atagataattccaaaagggtccaacatactgcgcttatcgactgtgatttgctagctaaa
gtttatataaatttgatagaccaaaaagaaccaactttagattttaaaaataaagaggaa
gaggtttcaaaattaaatactgaaaaagttatctactctaaaaaggttattaaaccgtcg
cctgaagagcttaaaaatcatcaaatttatcttaagacttctcttaaaaaaaacttttat
taa
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