Candidatus Pelagibacter sp. RS39: B5L73_00660
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Entry
B5L73_00660 CDS
T11425
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pela Candidatus Pelagibacter sp. RS39
Pathway
pela03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5L73_00660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pela03019
]
B5L73_00660
03016 Transfer RNA biogenesis [BR:
pela03016
]
B5L73_00660
Enzymes [BR:
pela01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B5L73_00660
Messenger RNA biogenesis [BR:
pela03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B5L73_00660
Transfer RNA biogenesis [BR:
pela03016
]
Prokaryotic type
tRNA degradation factors
B5L73_00660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ARJ47341
LinkDB
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Position
114139..116211
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AA seq
690 aa
AA seq
DB search
MFKVYKKEIKVAGKKISLETGKVARQADGAIIATCGETVVLATVVGAKKVDPDMDYFPLS
VNYQEKYYAAGKIPGGYFKREARPTESETLISRLIDRPIRPLFPDEFKNEVQLLPTVISY
DKENEPDILSITASSAALAISGMPFMGPVGASRVGFIDGKYVLNPSKTELENSSLDLVVA
GTKDAVLMVESEANGLSEEEMLNAVKFGHEGFVPVIEMIEELAKECRKPEWTVEMKDLSK
VKKKLEETFTEDLKKAFATRDKQDRSNQISEITDKAKKLFDEDENYTDLDVNSELKKIEK
SIVRTDILKNKNRIDGRGLSDVRPISCEVGILPRVHGSALFTRGETQAIVTATLGTSDDE
QRIESLDGLQKERFMLHYNFPPFSVGETGRIGTGRREIGHGKLAWRAIHSSLPSKEAFPY
SFRVVSEITESNGSSSMATVCGTSLALMDAGVPIKEPVAGIAMGLIKEGDDFSVLSDILG
DEDHLGDMDFKVAGTKDGITSLQMDIKITGITFEIMEQALSQAKDGRVHILGEMNKALSA
SRADVGKHTPKMEKINVDKKDIAAVIGKGGATIREIVEKSGAKVDVNDEGVVTVAAPDEE
SRNIAMQMIKDITAKAELNKIYSGKVMKIMEFGAFVNFLGKQDGLVHISELADKRVAKVT
DVVKEGDEVKVKVIGFDRGKVKLSMKQAAE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagtatataagaaggaaattaaagtagcaggaaagaagataagtttagaaaca
ggtaaagtagcaagacaggcagacggtgcaataatcgcaacatgtggagagacagtcgta
ctagcaacagtagtaggagcaaaaaaagtagatcctgatatggattactttccattatct
gttaattaccaagaaaaatactacgcagctggaaaaattccaggtggatattttaaaaga
gaagcaagaccaacagaaagcgaaacattaatctctagattgattgatagaccaatcaga
ccattgtttcctgatgaatttaaaaatgaagtacagttattaccaacagtaatttcatac
gataaagaaaatgaaccagatattttatcaatcactgcatcctctgcagcattagctata
tcaggaatgccatttatgggtccagtaggagcttctagagttggttttattgacggtaaa
tatgttttgaatccttctaaaactgaattagagaactcaagtctagatttagttgtagca
ggtacaaaagatgctgtgcttatggttgaatctgaagcaaatggtttgagtgaagaagaa
atgttgaatgcagtaaaatttggacatgagggttttgttccagtaattgaaatgattgag
gaacttgcaaaagaatgtagaaaacctgagtggacagtagaaatgaaagatttatctaaa
gttaagaaaaaactcgaagaaacttttacggaagaccttaaaaaagcttttgcaactaga
gacaaacaagatagatcaaatcaaatttctgaaatcactgataaagctaaaaaacttttt
gatgaagacgaaaattacacagatctagatgtaaattctgaacttaaaaagatagaaaaa
tcaattgtaagaacagatattcttaaaaataagaacagaattgatggtagaggattatca
gatgttagacctatttcttgtgaagttggaattttaccaagagtccatggttctgctcta
ttcactagaggagaaacacaagcaattgtaacagctactttgggcacttctgatgacgaa
caaagaattgaaagtttggatggattacaaaaagagagatttatgcttcactataatttt
ccgccattctcagttggagaaacgggaaggattggaactggaagaagagaaataggacat
ggtaaattagcgtggagggctattcattcttcattaccatcaaaagaggcgtttccttat
agctttagagtagtatctgaaatcacggagtcaaatggttcatcttcaatggctaccgtt
tgtggtacatcattagcattaatggatgccggagttccgattaaagaaccagttgcaggt
atagcaatgggtttaattaaagaaggtgatgattttagtgtcttatcagacattttaggt
gatgaagatcacttaggagatatggactttaaagttgcaggaactaaagatggaattact
tctcttcaaatggatattaaaattactggtattacatttgaaattatggagcaagcatta
agtcaagctaaagatggacgagttcatatcttgggagaaatgaataaagcattatcagct
tcaagagcagatgttggaaaacacactccaaaaatggaaaaaataaatgtcgataaaaaa
gacattgcggctgtgattggaaaaggtggagcaacgattagagagatagtcgagaaatca
ggtgcaaaagtagatgtaaacgatgaaggcgtagttacagttgctgctccggatgaagaa
tcgagaaatattgcaatgcaaatgatcaaagacattactgccaaagctgaattaaataaa
atttattcaggaaaagttatgaagattatggaatttggtgcatttgttaatttcttagga
aaacaagatggacttgttcatatttcagaacttgcagataaaagagtagctaaagtaact
gacgttgtcaaagaaggtgacgaggtaaaagttaaagtgattggtttcgatagaggtaaa
gttaagttatctatgaaacaagcagctgaatag
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