Candidatus Pelagibacter sp. RS39: B5L73_00870
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Entry
B5L73_00870 CDS
T11425
Name
(GenBank) dihydropyrimidine dehydrogenase
KO
K00266
glutamate synthase (NADPH) small chain [EC:
1.4.1.13
]
Organism
pela Candidatus Pelagibacter sp. RS39
Pathway
pela00250
Alanine, aspartate and glutamate metabolism
pela00910
Nitrogen metabolism
pela01100
Metabolic pathways
pela01110
Biosynthesis of secondary metabolites
pela01120
Microbial metabolism in diverse environments
pela01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
B5L73_00870
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
B5L73_00870
Enzymes [BR:
pela01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.13 glutamate synthase (NADPH)
B5L73_00870
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Gene cluster
GFIT
Motif
Pfam:
Fer4_20
Pyr_redox_2
Pyr_redox_3
NAD_binding_8
Pyr_redox
HI0933_like
Thi4
DAO
NAD_binding_7
FAD_oxidored
2-Hacid_dh_C
Amino_oxidase
FAD_binding_3
Shikimate_DH
AlaDh_PNT_C
F420_oxidored
NAD_binding_2
FAD_binding_2
MurD-like_N
NAD_binding_9
GIDA
ApbA
Lycopene_cycl
KARI_N
Glu_dehyd_C
3HCDH_N
zf-CCCH_7
Fer4_8
Motif
Other DBs
NCBI-ProteinID:
ARJ47378
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Position
153648..155087
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AA seq
479 aa
AA seq
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MTDKMLKFVKIGQQTPPKRKIGTRREDFNEIYDEFVTKKAEEQSSRCSQCGVPFCQVHCP
LSNNIPDWLKLTAEGRLKEAYELSQSTNNMPEVCGRICPQDRLCEGNCVIEQSGHGTVTI
GAVEKYINDTAWEQGWVKPISLKHEKEQSIGIIGAGPAGLAAAEQLRKNGYKITVYDRYD
RAGGLLIYGIPNFKLEKHVVERRIKLLKDGGIEFIQNFEVGKDATLEQLRKKHDAILIAT
GVYKPREVELPGNDLGNIFPAMEFLTASNKKGLGDKVELFDKGILNAEGKDVVVIGGGDT
AMDCVRTSVRQKAKSVKCLYRRDKENMPGSAREVANAEEEGVEFVWLSSPKEFKGKNKIE
NLVVNRIELGEPDESGRRKPEIKEGSEFTVKADMVIKALGFDPENLPLLFDAQDLQVTKW
GTIKTDFNSMETNLKGVFAAGDIVRGASLVVWAIKDGRDAASSIKKYLESMELKKTKVA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaaatgttaaaatttgtgaaaataggtcaacaaactccacctaaaaggaag
attggtactagaagagaagattttaatgagatctatgacgagtttgttaccaaaaaagct
gaagaacaatcgagtagatgttctcaatgcggggttcctttttgtcaagtacactgtcct
ttaagcaacaatataccagattggttaaaacttacagctgagggaagattaaaagaggcc
tacgaactatctcaaagtaccaacaatatgccagaggtatgtggaagaatttgtcctcag
gatagactgtgtgagggtaactgcgttattgaacaatctggacatggaacagtaactatt
ggtgcagttgagaaatatattaatgatacagcgtgggaacagggctgggttaaaccaatt
tctttaaaacatgagaaagaacaaagtattggaataattggtgccggtcccgcaggttta
gcagctgctgagcaattaagaaaaaacggatataaaattactgtttatgatcgatatgat
cgtgcaggtggattattaatttatggtattccaaatttcaaacttgaaaaacatgtagtt
gagcgaagaataaaattattaaaagatggtggaatagaatttattcagaattttgaagtt
ggtaaagatgcaaccttagaacagttacgaaaaaagcatgatgcaattttaattgctaca
ggtgtatataaaccaagagaagttgaattacctggtaatgatctaggtaatatttttcct
gcaatggaatttttgacagcatcaaacaaaaaaggcctgggtgataaagtggagttgttt
gataaaggaattttgaatgcagaaggaaaagatgttgttgtgataggtggtggcgacaca
gctatggattgcgtaagaacttcggtaagacaaaaagcaaaatcggtaaaatgtttatat
agaagagataaagaaaatatgcccggatctgctagagaagttgcaaatgcagaggaggaa
ggtgtagaatttgtttggctttctagtccaaaagaatttaaaggaaaaaacaaaattgaa
aatttagttgttaatcgaattgaattaggtgaaccagacgagtcaggaagacgaaaacca
gagataaaagagggttcagaatttacggttaaagctgatatggtaatcaaagctcttgga
tttgatccagaaaatttaccattattgtttgatgcacaagatttacaagtaacgaaatgg
ggaacaatcaaaactgattttaattcgatggaaacaaatctaaaaggtgtttttgctgca
ggagacattgtaagaggagcttcgttagtagtatgggcaatcaaagatgggagagatgca
gcctcttctataaaaaaatatttagaaagtatggaactaaaaaaaacaaaagtggcttaa
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