Candidatus Pelagibacter sp. RS39: B5L73_00890
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Entry
B5L73_00890 CDS
T11425
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pela Candidatus Pelagibacter sp. RS39
Pathway
pela00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
B5L73_00890
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pela01007
]
B5L73_00890
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pela03016
]
B5L73_00890
Enzymes [BR:
pela01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
B5L73_00890
Amino acid related enzymes [BR:
pela01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
B5L73_00890
Transfer RNA biogenesis [BR:
pela03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
B5L73_00890
Prokaryotic type
B5L73_00890
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
EcKL
Motif
Other DBs
NCBI-ProteinID:
ARJ47380
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All DBs
Position
161529..163448
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AA seq
639 aa
AA seq
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MPIITLPDGKNIEFPKEVTGLDIAEKISKSLSKQALIMSVNGELKDLYFSIKKDCSVKIF
TAKDPEGLEVIRHDTAHIMAMAVQELYPGTQVTIGPVIENGFYYDFARKEPFTEDDLEKI
EKKMSEIVDKDIKTKREVWKRDKAISHFKEIGENYKAEIIESIPEGEELTVYHHGDTWYD
LCRGPHLVSSGKIGKAFKLTKVAGAYWRGDSNNEMLQRIYGTGWAAQKDLDDYLKRIEEA
EKRDHRKLGKEMDLFHFREESPGSVFWHEKGWALFQKLINYMRARQDAAGYKEVNTPEVL
DRLLWEKSGHWEKYGENMYTSETPDEKVFAIKPMNCPGHIQVFNQGLKSYRDLPLRITEF
GKVHRYEPSGALHGLLRVRAFTQDDAHIFCSEDQITSECLNVTNLILDIYKDLGFEKVVL
KYADRPEVRVGEDKVWDKAEASLLEAVKATKLEYSINKGEGAFYGPKIEFVLRDAIGRDW
QCGTVQVDLNLPGRLDATYVDKDGTKKVPVMLHRALFGSLERFIGILIENYAGKFPFWIS
PLQIVVIPISGDFEEYAIKVSKKIKEAGMSSTVDLKNHNLNYKIREHSLAKVPILLICGK
KEVDSNSVTIRRLDSNKQENMELNKFLKTFSALNKAPSI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcctataattacactaccagatggaaaaaatattgaatttccaaaagaggttacaggt
ttagatattgcagaaaaaataagtaagtcattatcaaaacaagcattgataatgagtgtg
aacggtgagctaaaagatctatatttttcaattaaaaaagattgttcagtaaaaattttt
actgcaaaagaccctgaaggacttgaggttattagacatgataccgctcatatcatggcg
atggctgttcaagaattataccctggtacgcaagtaactattggacctgtaattgaaaat
ggtttttattatgattttgctcgcaaagaaccctttacagaggatgatctagaaaaaata
gaaaaaaaaatgtctgaaatagttgacaaagatataaaaacaaaaagagaggtttggaaa
agagataaagcaataagccattttaaagaaattggtgaaaactataaagcagagataata
gagagtatacctgagggcgaagaactaactgtttatcatcatggtgatacttggtatgac
ttatgtagaggtccacacttagtttcatctggcaaaattggtaaagcttttaaacttaca
aaagttgctggagcatattggcgtggagattcaaataatgaaatgttacaaagaatttac
ggaactggctgggccgctcaaaaagatttagatgattatttaaaaagaattgaggaagca
gagaaaagagatcacagaaaacttggtaaagaaatggatttgtttcatttcagagaggaa
agcccaggatctgttttctggcatgagaagggttgggcattatttcaaaaattgattaac
tacatgcgggctcggcaagatgcagcaggatataaggaagtaaataccccagaggtatta
gatagattattatgggaaaaatcgggacattgggaaaaatatggagaaaacatgtataca
tccgagactcctgatgaaaaagtttttgcgataaaacctatgaattgtccaggtcatata
caagtttttaatcaaggtttaaaaagttatagagacttaccattaagaataacagaattt
ggcaaagtacatcgatatgagccctcaggtgctttgcatggacttctaagagtaagggct
tttacacaagatgatgctcatattttttgttcggaagatcaaatcactagtgagtgttta
aatgtaactaatttaattttagatatttataaagatttaggttttgaaaaagtggttttg
aaatatgctgacagaccagaagtaagagtgggcgaagataaagtttgggataaagctgag
gcttcattactggaggcagtaaaagcaactaaattagagtacagtattaataagggagaa
ggagccttttatggtccaaaaatagaatttgttttaagagatgcaattggtagagattgg
caatgtggaacagtacaagtagatttaaacttacctggaagattagatgctacttatgta
gataaagatggaacaaaaaaagttcctgtgatgttacatagagcattgtttggatcactt
gaaagatttattggaattttaattgaaaattatgctggaaagtttccattttggatatct
ccattacaaatagtagtaattcctatctcaggagattttgaggaatatgcaataaaagtt
tcaaaaaaaataaaagaagctgggatgagttcaacagtcgatttaaaaaatcataatttg
aattataaaataagagaacattcccttgcaaaagtccctattttattaatttgtggtaaa
aaagaagttgacagtaactcggtaactattagaagattggattctaataaacaagaaaat
atggaattaaataaatttttaaaaacattttctgctttaaataaagcaccctcaatttaa
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