Candidatus Pelagibacter sp. RS39: B5L73_00975
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Entry
B5L73_00975 CDS
T11425
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pela Candidatus Pelagibacter sp. RS39
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pela03032
]
B5L73_00975
03400 DNA repair and recombination proteins [BR:
pela03400
]
B5L73_00975
Enzymes [BR:
pela01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B5L73_00975
DNA replication proteins [BR:
pela03032
]
Prokaryotic type
DNA Topoisomerases
B5L73_00975
DNA repair and recombination proteins [BR:
pela03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B5L73_00975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ARJ47396
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Position
178086..180143
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AA seq
685 aa
AA seq
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MTNKNTYQADSIKVLKGLEAVRKRPGMYIGDTDDGTGLHHMVYEVVDNSIDEALAGYCKN
INVKLNSDGTVTVNDDGRGIPTDIHKGEKKSAAEVIMTQLHAGGKFDHDSYKVSGGLHGV
GVSVVNALSEKLFLEINRDGKKHSIEFRNGEAKAPLKIAGKSKQTGTQITFLPSKEVFSS
IKFSANILIKRMRELAFLNKGIKITFTDNSQKKEKILEFKYDGGLIEFVDYLDEKREKLQ
NKNGNDLFRKPIYIEGKRNNVELECSLKWNAGYSEDIFPYTNNIYQKDGGTHLLGFRSAL
TRIINKYANENNLLKKNKLTISGDDIKEGLTCVLSAKIPDPKFSSQTKDKLVSSEVRMIV
ETLVNEKLSIWFDQNPSVAKIVLAKIIQAAMARDVARKARENVRRKGAIELSGLPGKLAD
CQIGKQEGTELFIVEGDSAGGSAKQGRNRSNQAVLPLRGKILNTYVEDLNIKKNGNGNGS
DQRTKALSKMISSNEILTLINALGLDPKAHEIDLKDLRYGKIIIMTDADVDGSHIRALLL
TFFNNKPFNKLIENGHVYLAQPPLFKINKGSKGIYIKDEDELENYIMSNSKEIKKSKRGS
KEFSKLIEMEKSKMSIQRFKGLGEMNPDELWSTTLNPETRNLLQVQYSKNSKKDQELIHT
LMGNDVTLRKDFIISNAINVQNLDI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataaaaatacatatcaagcagattcgatcaaagtacttaaaggtttagaggca
gtaagaaaaagaccaggtatgtatattggtgataccgatgatggaactggtttgcaccac
atggtttatgaagttgtagataattcaattgatgaagccctagcaggatattgtaaaaat
attaatgtaaaattaaattctgatggaactgtgactgttaatgatgatggtcgtggaatt
cctacagatatacataaaggtgaaaaaaaatctgctgccgaagtaatcatgacccaactt
catgctggtggaaaatttgaccatgactcttacaaagtttctggaggtttgcatggtgtg
ggagtatctgttgttaatgctctttcagaaaagctttttttagaaataaacagagatgga
aaaaaacattctattgaatttcgtaatggtgaagcaaaagcacctctaaagattgctggt
aaatcaaaacagacaggtactcaaataactttcttgccttcaaaagaagttttctcatca
atcaaatttagtgcaaatattctaatcaagagaatgagagaattagcattcttaaataaa
ggtataaaaataactttcactgacaatagtcaaaaaaaagaaaaaatcttagaattcaaa
tatgatggaggattgattgaatttgtagactatttagatgaaaagagagaaaagttacaa
aacaaaaatggaaatgatttatttagaaaacctatatatattgaaggcaaaagaaataat
gtagaactagagtgttcattaaaatggaatgcaggttattcagaggatatttttccttat
actaataatatttaccaaaaagatggaggaacacatttattaggtttcagaagtgcttta
acaagaattataaataaatatgcaaacgaaaataatcttcttaaaaagaataaactaaca
atttctggagatgacattaaagaaggtttaacatgcgttttatcagccaaaatccctgat
cctaaattttcttctcaaacaaaagacaagctagtgtcttcagaagtaagaatgatagtt
gaaacactagtgaatgaaaaattatctatctggtttgatcaaaatccatctgtagctaaa
atagttttagctaaaattatacaggccgcaatggctagagatgtggctagaaaagcaaga
gaaaatgttagaaggaaaggagcaattgaattaagcggcctcccaggaaaattagcagat
tgtcaaatagggaaacaagagggaacagaactatttattgttgagggagattcagcaggt
ggttctgcaaaacaagggaggaatagatcaaatcaagcagttttacccttgagaggaaaa
atacttaatacttatgttgaagatttaaatataaaaaaaaatgggaacggaaatggctct
gatcaaagaacaaaggcattgtctaaaatgatatcttcaaatgaaatattaactttgatt
aacgcacttggacttgatccaaaagctcatgaaattgatttaaaagatttaaggtatggg
aaaataattataatgacggatgctgatgttgatggatctcatatcagagcattattatta
actttcttcaacaataaaccttttaataaattgattgaaaatggtcacgtgtacctagct
caaccaccgctatttaagattaataaaggctctaaaggaatatatattaaagacgaggat
gaattagaaaattatataatgtctaatagcaaggaaattaaaaaatctaagagaggttca
aaagagttttcgaaattgatagaaatggaaaagtctaaaatgagcatacaaaggtttaag
ggtttgggagaaatgaacccggatgagctttggagtacaactcttaatccagaaactaga
aatttacttcaggttcaatattcaaaaaactcaaaaaaagaccaggaattaatacatact
ttaatgggcaacgatgtaacattaagaaaagattttattatttctaacgcaataaatgtt
caaaatttagatatttag
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