Candidatus Pelagibacter sp. RS39: B5L73_01035
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Entry
B5L73_01035 CDS
T11425
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pela Candidatus Pelagibacter sp. RS39
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pela03016
]
B5L73_01035
Enzymes [BR:
pela01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
B5L73_01035
Transfer RNA biogenesis [BR:
pela03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B5L73_01035
Prokaryotic type
B5L73_01035
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ARJ47407
LinkDB
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Position
190046..190786
Genome browser
AA seq
246 aa
AA seq
DB search
MFRYQILIEYVGTDFRGWQIQTKGKTIQGLIQERISKLLKEKTILFGAGRLDKGVHALEQ
SAHFECKKKIENLNKFVKSLNFFLNKEMITIIKIKKRSKDFHARFSARMRIYKYIIINRL
SRPVLDKNRGWHIINKLDLITMKKAAKKLVGTKDFSTFRASSCRAKSPIKTMKSVKVKSR
NDKIEIEFQSQSFLQQQVRSMVGCLKYVGEKKWTLKKFSFVMNSKKRILCAPPAPPEGLY
LARVIY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtttagatatcaaatattgattgaatatgtgggtaccgattttagaggttggcaaatt
caaacaaaaggcaaaactatacaaggtcttattcaagagagaatttcaaaattattaaaa
gaaaaaactattttgtttggtgctggaagactagataaaggagtacatgcgcttgaacaa
tctgcacattttgagtgtaaaaaaaaaattgaaaatttgaataaatttgtcaaatcttta
aatttttttttaaacaaggaaatgattacaattattaaaattaaaaaaagaagtaaagat
tttcacgcaagattttctgcgagaatgagaatatataaatatataataattaatcgttta
agtagacctgtattagataaaaatagaggatggcacattattaataaactcgatttaata
acaatgaaaaaagctgcaaaaaagttagttggcacaaaggatttttctacattcagagct
tctagttgtagagccaaaagtccaattaaaactatgaaatctgttaaagtaaaatctaga
aatgataaaatagaaatagaatttcaatctcaatcttttcttcaacagcaagttagatca
atggttggttgtttaaaatatgtaggcgaaaaaaaatggactttaaaaaaatttagcttt
gttatgaactcaaaaaaaaggatattgtgtgcaccgccagcaccacctgaaggactttat
ctagcaagagttatttattaa
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