Candidatus Pelagibacter sp. RS39: B5L73_02090
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Entry
B5L73_02090 CDS
T11425
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pela Candidatus Pelagibacter sp. RS39
Pathway
pela00020
Citrate cycle (TCA cycle)
pela00480
Glutathione metabolism
pela00720
Other carbon fixation pathways
pela01100
Metabolic pathways
pela01110
Biosynthesis of secondary metabolites
pela01120
Microbial metabolism in diverse environments
pela01200
Carbon metabolism
pela01210
2-Oxocarboxylic acid metabolism
pela01230
Biosynthesis of amino acids
pela04146
Peroxisome
Module
pela_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pela_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
B5L73_02090
09102 Energy metabolism
00720 Other carbon fixation pathways
B5L73_02090
09106 Metabolism of other amino acids
00480 Glutathione metabolism
B5L73_02090
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
B5L73_02090
Enzymes [BR:
pela01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
B5L73_02090
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NCBI-ProteinID:
ARJ47604
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Position
complement(389382..390596)
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AA seq
404 aa
AA seq
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MSKITVKNPIVELDGDEMTRIIWEFIKKKLILPYLDIGIEYYDLGMKSRDDTDDQITVDS
ANAIKKIGVGIKCATITPDEARVEEFDLKKMWRSPNGTIRNIIGGTVFREPIICSNIPKL
VPSWSDPVVIGRHAFGDQYRATDFKVPGKGKMEVKWTSEDGKDEIKYEVFNFTGPGVALS
MYNLDKSIEDFARSCFSYGLIKKWPVYLSTKNTILKKYDGRFKDIFEEVFNKEFKEKFDK
EKITYEHRLIDDMVACAMKWSGKYIWACKNYDGDVQSDTMAQGYGSLGLMTSTLLTPDGK
IMEAEAAHGTVTRHYRMHQQGKETSTNPIASIFAWTRGLAHRGKLDGNDDLIKFANTIEQ
VCIGCVESGSMTKDLAILVGPSSKYLTTNQFLDEIDNNLKKKLN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaaattactgtaaaaaaccctattgtagagttagatggtgatgaaatgaccaga
ataatctgggaatttattaaaaaaaaattaatccttccttatcttgatatcggtattgag
tactacgatttgggtatgaagagtagagatgatactgatgaccagattacagtagactct
gctaatgcaattaagaaaattggtgtaggtataaagtgtgcaaccatcacccctgatgaa
gcacgagttgaagaatttgatttaaaaaaaatgtggagatcaccaaatggaacaataaga
aatatcattggtggaactgtttttagagagcccataatttgttctaacattccaaaatta
gtaccttcatggtcagatccagttgtaattggtagacatgcttttggtgatcagtacaga
gcaactgattttaaagtcccaggtaaaggaaagatggaagttaagtggacatctgaggat
ggtaaagatgaaataaaatatgaagtatttaattttactggaccaggagtagccctttct
atgtataatctagataaatctattgaggattttgcaagatcttgttttagctacggtctt
ataaaaaagtggcccgtctatctttcaacaaaaaacacgatcctaaaaaagtacgatgga
cgttttaaagatatatttgaggaagtatttaataaagaatttaaagaaaaatttgataag
gaaaaaattacttatgaacatagattaattgacgacatggtggcttgtgcaatgaaatgg
agtggaaaatatatttgggcttgtaaaaattacgatggtgatgttcagtctgatacgatg
gctcaaggttatggttctcttggtttaatgacaagtacattattaactcctgatggaaaa
attatggaagccgaagcagcacatggaactgtcacaagacactatagaatgcatcaacaa
ggaaaagaaacatcaaccaatcctattgcctcaatttttgcctggacaagaggtttagct
caccgaggtaaattagatggaaatgatgatcttataaagtttgctaatacaattgagcaa
gtttgtattggttgtgttgaaagtggttctatgaccaaagacctagcgatattagttggg
ccatcaagtaagtatttaaccactaatcaatttctagatgaaattgataataatttaaaa
aagaaattaaattaa
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