Candidatus Pelagibacter sp. RS39: B5L73_02150
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Entry
B5L73_02150 CDS
T11425
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pela Candidatus Pelagibacter sp. RS39
Pathway
pela02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B5L73_02150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pela02000
]
B5L73_02150
Transporters [BR:
pela02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
B5L73_02150
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NCBI-ProteinID:
ARJ47616
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Position
400677..401804
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AA seq
375 aa
AA seq
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MKKLSKILLAISFVLSLTTSAFATTVTAVSWGGAYTESQKLGYGDPTAKKLGINIAWVDY
SGGLSEIKAQKEAGKITWDIMDVFAMDTINGCDEGLFVEFDFDKDFPPAPDGTPASKDFF
TAMPSKCAVGNILYSWNYAYNTENVKGTPKTIKDFFNTKKFPGKRAIYKSALTNLEIALA
ADGIKPGKGGAKIYKALETEKGVERAMNKIKKLCTDPKGGCVFWSAGAQPPELLVSGEVV
MATGWNGRFFNAEIGEGAPIKQVWDGQGLDYEYFVQVKGGPNDANGMAKKALAMMTSTEM
LAGSAKYIAYAPWRKSSIAIMEKGEPWYKDGKTNMVPQMPTAPANTKNYFLVDPIFWADN
GTELGEKWEAMKAGL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactaagtaaaatattactagctatttcttttgtactttcactaactacttca
gcatttgcaacaacagtaactgcagtgtcttggggtggggcttatactgagtctcaaaag
ttaggttatggtgatcctactgctaaaaaactaggcattaatattgcttgggttgattat
tcaggtggtttatcagaaatcaaagcacaaaaagaagctggaaagatcacgtgggatata
atggacgtgtttgcaatggatactatcaatggatgtgatgaaggattatttgttgaattt
gattttgacaaagatttcccgccagctccagatggaactccagcaagtaaagatttcttt
actgcaatgccaagtaaatgtgctgtaggaaatattttatattcttggaactacgcttat
aacactgaaaacgttaaaggtactccaaagactatcaaagatttctttaacacaaagaaa
ttccctggaaaaagagctatctacaaaagcgctctaactaatttagagatcgctttagct
gcagatggtatcaaaccaggtaaaggcggagcaaaaatctacaaagctttagaaacagaa
aaaggtgttgaaagagcaatgaacaagatcaaaaaattatgtacagatccaaaaggtgga
tgtgtattttggtctgcaggtgctcaaccaccagaactgttagtatcaggtgaagtagta
atggctactggttggaatggtagattcttcaatgcagaaattggagaaggtgcaccaatc
aaacaagtttgggatggccaaggtcttgactatgaatatttcgtacaagttaaaggcgga
ccaaacgatgctaatggtatggctaaaaaagctttagctatgatgactagcacagagatg
ttagcaggaagtgctaaatacatcgcatatgcgccttggagaaaatcttcaatcgcaatt
atggaaaaaggtgagccgtggtataaagatggtaagactaacatggtaccacaaatgcca
actgcaccagctaacactaaaaactacttcctagtagatccaattttctgggctgataat
ggaacagagcttggtgaaaaatgggaagctatgaaagctggtctataa
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