Candidatus Pelagibacter sp. RS39: B5L73_03445
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Entry
B5L73_03445 CDS
T11425
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pela Candidatus Pelagibacter sp. RS39
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pela03032
]
B5L73_03445
03400 DNA repair and recombination proteins [BR:
pela03400
]
B5L73_03445
Enzymes [BR:
pela01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B5L73_03445
DNA replication proteins [BR:
pela03032
]
Prokaryotic type
DNA Topoisomerases
B5L73_03445
DNA repair and recombination proteins [BR:
pela03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B5L73_03445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ARJ47857
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Position
648495..651074
Genome browser
AA seq
859 aa
AA seq
DB search
MEKNEVSKDKNIKLISMHDEMSSSYLSYAMSVIVSRALPDVRDGLKPVHRRILYAMYKGG
YDWSKQFRKSARIVGDVIGKYHPHGDQSVYDALVRMVQDFSMSLPLVDGQGNFGSIDGDP
AAAMRYTETRLSKVSQFLIDDIEKKTIDFKSNYDETEKEPTVLPAQFPNLLVNGAGGIAV
GMATSIPPHNLGEIINGTLALIDNKDIKIKDLMKHIPGPDFPTGGIIIGKDIIKQGYNKG
RGSFKIRGEISIETLKNGRDRLVINSIPYQVNKSVLNERIAQLVREKKIEGIRDIRDESN
REGIRVSIDLRTGVEPETVKRQLYKNTQIESSFGFNTLAIVDGKPKTCNLKEFLENFLEF
REDVVLKKTKFDLNKAEDRAHILIGLSVSVENLDKVIKIIRGSKTPDDAKKALLNTKWKI
NKSKKMISLIESKNSKGLYNLSTVQVEAILELRLQKLTALGINEIEVEIKRLSELISSLK
KIISSKKELLKVISNELNEIKDKYATPRRTKIIDAILNYDIEETIQKETVLITVTLQGYI
KRGSLKSVKIQKRGGKGKTGITTRNEDSVVQTLSVNTHTSVLFFSTEGLVYKIKAWKIPE
GSASSKGKSLFNILPLKNHQSISSIMPFPESEEDSSKYQIIFATSKGKVRKNSLEDFSSI
NTAGKIAMKLDTNDKIIGVKICKDDQDIILSTKFGKCIRFESKKLRIFKGRSSKGIKGIE
LAPNDEIVSLSIIDNNKIKKNGKNTKDDKSELAAKQKFILSISENGFGKKTSHYDYRTTN
RGGKGIIGIINSPRNGNIASSFPVYEGDEIMISTNKGRVIRLAVKEIRTAGRNTQGVRII
KLSGDEKVVSAIKIDDNLI
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaacgaagtttctaaagataagaatataaaattaatctcaatgcatgatgag
atgagctcatcttatctatcatatgcaatgagcgtcattgtcagcagagcgcttccagat
gttagagatggtctaaaacctgttcatagaagaatattatatgcgatgtataaaggtggt
tatgattggtctaaacaatttagaaaatctgcaagaatagttggggatgtaattggtaaa
tatcacccacatggtgatcaatctgtttatgacgcacttgttcgtatggttcaagatttt
tcaatgagtttaccccttgtagatggtcaaggaaattttggatctatagacggtgatcca
gcagcggccatgagatacacagaaactagactatcaaaagtttcacaatttttgatagat
gatattgaaaaaaagacaattgattttaaaagcaattatgatgaaacagaaaaagaacca
actgtgttacctgctcagtttccaaatcttttagtaaatggagcagggggtattgctgtt
ggtatggccacaagtattccacctcacaacttaggagaaataatcaatggcacattagct
ttaattgacaacaaagatataaagattaaagatcttatgaaacacattcctggacctgac
tttcctacaggcggtataattattggtaaggatatcattaaacagggatacaataaaggt
agaggttcttttaaaattagaggggagatatcaatcgaaacacttaagaatggtagagat
agattagttataaattcaattccataccaagttaataaatcggtattaaatgaaaggata
gcacaattagttagagaaaaaaagatagagggtattagagatatacgagatgagtccaat
agagagggaatcagagtttcaatagatttaagaactggtgttgaaccagagactgtaaaa
agacaactatacaagaacactcaaatagaaagctcatttggatttaatacacttgcgatt
gttgatggtaaaccaaagacttgtaatctaaaagaatttttagagaattttttagaattt
agggaagatgtcgtacttaagaaaacaaaatttgatctcaacaaagcagaagacagagca
catatcttaattggtctttccgtatcagttgagaatttagataaagttataaagattata
agaggttcaaaaactccagatgatgcaaaaaaagctttattaaatactaagtggaaaatc
aataaatcaaaaaaaatgatttcattaatagaaagtaaaaactctaagggtctttataat
ttatcaactgttcaggttgaagctatattggaattaagattacaaaaattaacagcactt
ggtataaatgaaatagaagttgaaataaaaagattatctgagttaatttcttcattaaaa
aaaatcatatcttcaaaaaaagaattattaaaagtaataagtaacgagcttaatgaaata
aaggataaatatgcgacaccaagaagaacaaaaatcatcgatgcaatacttaattatgat
atcgaggaaacaatacaaaaagaaactgttcttataaccgttaccttacaaggatatata
aaaagaggatcacttaaaagtgtaaaaattcaaaaaaggggaggaaaaggtaaaactggt
atcacaactagaaatgaagactctgtagttcaaacgctatcagttaatactcatacctct
gtgttatttttttctacagaaggtcttgtttataaaataaaagcatggaaaattcccgaa
ggttcagcatcatctaaaggtaaatctttattcaatattttgccgcttaaaaaccatcaa
tcaataagctcaattatgccatttcctgaaagtgaggaagattcaagcaaatatcagata
atttttgcaacttcaaaaggcaaggttagaaaaaatagtttagaagatttctcttcaatt
aatacagctggaaaaatagcaatgaaactagatactaatgataaaataattggagttaaa
atatgtaaagatgatcaagatataatcctgagtacaaaatttggaaaatgtatcagattt
gagtctaaaaaattaagaatatttaagggcagatcgtcaaaaggtataaagggaatagaa
ttagcacctaatgatgaaatagtttctttatcaataattgacaataataagattaagaaa
aatggaaaaaatacaaaagatgataagtctgaattagcagcaaaacaaaagtttatttta
tctattagtgaaaatggttttggtaagaaaacctcgcattatgactacagaacaacaaat
agaggtggtaaaggaattattggaataattaattcacccagaaatggaaatattgcatca
tcgtttcctgtgtatgagggagatgaaataatgatttcaacaaacaaaggtcgagttata
agattagcagttaaagaaattagaacagctggaagaaacactcaaggagtaagaataatc
aagttatctggtgatgaaaaagttgtttcagcaattaaaattgatgataatttaatataa
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