Candidatus Pelagibacter sp. RS39: B5L73_03480
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Entry
B5L73_03480 CDS
T11425
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
pela Candidatus Pelagibacter sp. RS39
Pathway
pela03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B5L73_03480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pela03400
]
B5L73_03480
Enzymes [BR:
pela01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B5L73_03480
DNA repair and recombination proteins [BR:
pela03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B5L73_03480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecG_wedge
ResIII
tRNA_anti-codon
RecG_dom3_C
AAA_30
Cas3-like_C_2
ERCC3_RAD25_C
DUF7952
Flavi_DEAD
IstB_IS21
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ARJ47862
LinkDB
All DBs
Position
complement(654947..656992)
Genome browser
AA seq
681 aa
AA seq
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MKRNYEYLLSDLNLLKGVGTKTSNLLKRKKINTIFDLLWKLPKSYTDRSLSSKIKDLKID
EIQTITIIPLKYSFPRVRNLPNRVLCKDDTGEIDCVFFNSYEGYIKKILPIGKEVTISGK
IKYFRNKYQLTNPKYISEDSSIIKQKHNSYSLTEGISEKVYNKIILQIINNLPQIEEWHS
KDILKKFNNISWNDSIKKLHEPENIGKFKENFYQRLAYDEIFSTFLVNSEIRKKIKRIKK
TKKIFDIKKQNEIISKLNFSLTNDQNKTLSEINKDLCSENKMFRLLQGDVGSGKTIVSLL
SAFNTVNSGFQVAVMAPTEILARQHFLLAKKLFSQNIKIDLLSGKSSYKDKKIILNKISN
KQIDIIFGTHALFQKKVEFKKLGLIIIDEQHKFGVNQRKKLSDKAGKDCDVLLMTATPIP
RTLTMTIYGDMDLSIIREKPNIRKPVKTYSKLEDKIDDVIKFVKKEIKLGNQIFWVCPLI
EESKKIDHSSAIKKSEYLNKLFPKQVFLLHGKTTTDEKEVILNKFLKNEFKILVSTTIIE
VGIDFPNANVIIIENANKFGLSQLHQLRGRVGRGSKESSCILMFKSNLSDNAKKRINILK
DSNDGFKISEEDMKLRGFGDILGFKQSGIKNFRLADPIHNHNLFILAEKEMKRIENYNED
ISKFKPLIKLYDRADIINDIA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaattatgaatacttattgtctgatctcaatttactaaaaggtgtaggaact
aaaacttcgaatttattaaagagaaaaaagataaatactatttttgatttattatggaaa
ttgccaaaatcctacactgatagaagtttatcatctaaaataaaagatttaaagatagat
gaaatacagaccataaccataatacctcttaaatattcattcccaagagttaggaactta
ccaaatagagttttgtgtaaagatgacactggtgaaatagattgtgttttttttaacagt
tacgaaggctacatcaaaaaaatattaccaattggcaaagaagtaactataagtggtaaa
atcaaatattttagaaataagtatcaattaacaaatccaaaatatatttcagaggactct
tcgataattaaacaaaaacataatagctattcattaactgagggaattagtgaaaaagtt
tataataagataattttacaaataataaataatttacctcaaattgaagaatggcattca
aaagatatattgaaaaaattcaacaatataagttggaatgactctatcaaaaaattacat
gaaccagaaaatatcggtaaatttaaagaaaatttttatcaaagacttgcttatgatgaa
attttctccacatttttagtaaactctgaaatacgaaaaaaaattaaaagaataaaaaaa
acaaaaaaaatttttgatataaaaaaacaaaatgaaattatatctaaacttaatttttca
ttaacaaatgaccaaaataaaacattaagcgaaataaataaagatttatgctctgaaaat
aagatgtttaggctacttcagggtgatgtaggcagtggaaaaacaattgtatctttgcta
tctgcatttaatacagttaactctggttttcaggtagcagtaatggcaccaactgaaata
ttagctagacaacattttcttttagctaaaaagctattttctcaaaatattaagattgat
ttactatctggtaaatcttcttacaaagataaaaaaataatcctcaacaaaatatctaat
aaacaaattgatataatttttggaacacatgcacttttccaaaaaaaagttgaatttaaa
aaacttggattaataataatagatgaacaacataaatttggagtaaatcaaagaaaaaaa
ttatctgataaagctgggaaagattgtgatgttcttttgatgactgctacaccaatccca
cgtactttaacaatgacaatttatggtgatatggatctttcaattattcgtgaaaaaccg
aatattcgtaaacctgtaaagacttatagcaaactcgaagataaaattgatgatgtaata
aaatttgtaaaaaaagaaatcaaactaggaaatcaaatattttgggtttgtcctttaatt
gaagagtctaaaaagattgatcattcttctgcaattaaaaaatctgaatatttaaataaa
ttatttcctaaacaagtttttttacttcacggtaaaactacaactgatgaaaaggaagtg
atcttaaacaaattcttaaaaaatgaatttaagattttggtttcgactactataattgaa
gttggtattgatttccctaacgcaaatgtaataattattgaaaatgcaaataaatttggt
ttatctcaactacatcaacttagaggtagagttggaagaggtagtaaagagtcatcatgt
attttaatgtttaagtcaaatttaagtgataatgcaaaaaaaagaattaatatacttaaa
gactctaatgatggcttcaaaatatctgaagaagatatgaaattgagaggttttggtgac
attttaggtttcaaacaaagtggaataaagaactttaggttagcagatccaattcataat
cataatctttttattttggctgaaaaagaaatgaaaaggattgaaaattacaatgaagat
attagtaaatttaaaccattaattaaattatatgatagagctgatataattaatgatatt
gcttaa
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