KEGG   Candidatus Pelagibacter sp. RS39: B5L73_03715
Entry
B5L73_03715       CDS       T11425                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pela  Candidatus Pelagibacter sp. RS39
Pathway
pela00740  Riboflavin metabolism
pela01100  Metabolic pathways
pela01110  Biosynthesis of secondary metabolites
pela01240  Biosynthesis of cofactors
pela02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pela00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    B5L73_03715
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    B5L73_03715
Enzymes [BR:pela01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     B5L73_03715
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     B5L73_03715
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: ARJ47904
LinkDB
Position
complement(692309..693415)
AA seq 368 aa
MSTKKDKFSSKDKLYMEIALKLAVSRYGHTGSNPSVGCVIVKNDKIISIGQTSINGRPHA
EFNAIKSSIENLRGSKMYVTLEPCCHHGVTPPCTDLIIKSKISEVIYSVSDIDIRVRNKS
FKILKSKKIKIRKGLLEEKVNNFYSTYFFNRKKKLPYVTGKIAVSKNNLIYSKLDRKITN
ARADKFTHLLRYKNDSLMISYKTLNNDNPKLNCRLKGLKKYSPRRIILDNKLNTNLNSFI
INTANKTNTIIFYNKASKSQILNFRKRGINLIFSKIDNQGRFDIKILLKRLYKMNCRNVL
IEGGDELTNHLLKNKIFNKFYLYKSNKKLSKKSEYLYFNSLDLLKQKYKKKINLKLNLGN
NKITLYKN
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgtctacaaaaaaagataaattttcatcaaaagacaaattatacatggagatagcctta
aaactggcagtatctcgatatggtcatacaggttcaaatccttctgttggatgtgtgatt
gtcaaaaacgataagattatttctattggtcaaacatcaataaatggaagaccccatgca
gaattcaatgcaatcaagagttctatagaaaatttaagaggatcaaaaatgtatgttacc
ttggaaccatgttgccatcatggcgtaacaccgccatgtacagatttaataataaaatct
aaaatttctgaggttatctattcagtttcagatattgatattagagttaggaacaaaagt
tttaaaattttaaaatcaaaaaaaattaagataagaaaagggcttttagaagaaaaagtt
aataatttttattcgacatatttttttaatagaaaaaaaaagttgccatatgtcactggt
aaaatcgctgtttcaaaaaataatctaatttatagtaaattggatagaaaaattactaat
gcaagggctgataaatttacacatctattaagatataagaatgattcattgatgatttca
tataaaactttaaataatgataatcctaaattaaattgcagattaaagggtttaaaaaaa
tattctccaagaagaattatcttagataataaactaaatacaaatcttaatagttttata
ataaatacagcaaataaaactaatactattattttttataataaagctagtaaatcacaa
attttaaattttagaaaaagaggaataaatttaatattctctaaaattgataatcaagga
agatttgatatcaaaattctattaaaaagactgtataaaatgaattgtagaaatgtatta
atagagggtggtgatgaattaactaaccatctattgaaaaataaaatttttaataagttt
tatttatacaaaagcaataaaaaactctcaaaaaaatcagaatatctatattttaatagc
ttagatttgttaaaacagaaatataaaaaaaaaattaacttaaaacttaatttaggaaat
aataaaataacattgtataaaaattaa

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