Candidatus Pelagibacter sp. RS39: B5L73_04345
Help
Entry
B5L73_04345 CDS
T11425
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K11690
TRAP-type transport system large permease protein
Organism
pela Candidatus Pelagibacter sp. RS39
Pathway
pela02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B5L73_04345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pela02000
]
B5L73_04345
Transporters [BR:
pela02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
B5L73_04345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Trp_oprn_chp
Motif
Other DBs
NCBI-ProteinID:
ARJ48022
LinkDB
All DBs
Position
complement(803032..804363)
Genome browser
AA seq
443 aa
AA seq
DB search
MDPLIIALIVAVFTLLVLFSGIPIAFGLSFVSIALLVTFEGFQMLDVFAETFFAGLNSFV
LLSIPMFILMGMAVANSPAGKDLYTGLDRWLWRVPGGLVISNIGACSIFAALSGSSPATC
AAIGTMGIPEMRKRGYSDQIATGTIAAGGTLGVLIPPSIVLIVYGIATGTSIGRLFLCGL
VPGFMLAGMFAIWALIHSYFIDKDAAKALRNRVRPTLKEKLEVLPRILPFLAIIAGVLYV
LYGGVATPSEASGVGAFLVFVLIAVVYKIYQPKKIWNIVKVSMKESVMIMFIIAASYLFA
FTLSQLYVTQSLAQSMVELSSNKWVVFILINIFLLIAGFFLPPVAVIVMTSAILLPVITT
LGFDPYWFAIVFTINMEIGLITPPVGLNLYIIKGITPDVSLSEILKGSIPFMIIMALAIV
ILCIFPEIVTWLPDKIMGKDLGF
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggatccattgattatagcattaattgttgcagtttttactttattggtacttttttct
ggaattccaattgcatttggtttgagttttgtttcgatagctcttttggtaacatttgaa
ggttttcaaatgcttgatgtctttgcggagacgttttttgcaggattaaattcttttgtt
ttactttcaataccaatgtttattttaatgggaatggcagttgccaattctcctgcagga
aaagatttatatacaggcttagatagatggctttggagagtaccgggaggactggtaatt
tcaaatattggagcttgttcaatttttgcagctttaagtggatctagtccagcaacttgt
gctgcaattggaacaatgggaataccggagatgagaaaaagaggttactccgaccaaatc
gcaacaggaaccattgctgctggaggaaccttaggagttttaattcctcctagtattgtt
ttaattgtttatggaatcgcaactggtacatcaattggaagattgtttttatgtggtctt
gtaccgggctttatgttggcaggtatgtttgcgatatgggctttaatacacagttatttt
attgataaagatgcagcaaaagctttaagaaatagagtaagaccaactttaaaagaaaaa
cttgaagtattaccaaggattcttcctttcttagcgattatcgctggtgtgttgtatgta
ctttatggaggagtcgcaacaccatcagaggcttctggagtaggggcatttttagttttt
gtattaattgctgttgtatacaaaatttatcagccaaaaaagatttggaacattgttaaa
gtttcaatgaaagaaagtgtaatgataatgttcattattgctgcttcatatctttttgca
ttcactctttcgcaactttatgtaactcaatctctagcacaaagcatggtggaattaagc
tcaaacaaatgggttgtgttcattctaataaacatatttcttttgatagctggtttcttt
ttacctccagttgcagttattgtaatgacctcagcaatattattgccagttattactact
ttaggttttgacccatattggtttgcaatagtatttacaatcaatatggagattggctta
attacaccaccagttggattaaatctttatattataaaaggaattaccccagacgttagt
ttgtcagaaattttaaaaggatctataccgtttatgataattatggctttagctatagta
attttatgtatttttcctgagattgttacatggctacctgataaaataatgggtaaagac
cttggattctaa
DBGET
integrated database retrieval system
