Candidatus Pelagibacter sp. RS39: B5L73_04790
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Entry
B5L73_04790 CDS
T11425
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pela Candidatus Pelagibacter sp. RS39
Pathway
pela00450
Selenocompound metabolism
pela01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
B5L73_04790
Enzymes [BR:
pela01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
B5L73_04790
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
B5L73_04790
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GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
ARJ48105
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Position
complement(884322..885542)
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AA seq
406 aa
AA seq
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MNINNIKKEFPIFDEKIQNNDLVYLDSANSSQKPKVVLDRINDFYSKQFSNVGRSIHYLA
VAATNLYENTRTSVQKYINAKDKNEIVFTKGATEALNLVANTLGQAILEPNDEILITELE
HHSNYVPWHFLRKSKNIKIKFAEINEDGDIPIENIEKEITEKTKVIAITHLSNVTGAVLP
IKEITQLAHSKGIVVVVDGCQGGPHLKLDMQDLDCDFYAISCHKMYGPTGLGVLYGKKKW
LEQLPPYQGGGGMINEVKKDRISYGDLPNKYEAGTMATAQVIAFNESIKFLESIGIENVI
KHEKELIEYGQEILKKNNSVKLIGNPKERGGVLSFTVEGVHPHDIATILDETGVAIRAGH
HCCQILHDKLGIPASARASLGVYNTKDDLDKLNEGINNCKKVFDLK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaataacattaaaaaagaatttccaatttttgatgaaaaaattcaaaataat
gatctagtttatttggatagcgctaattcatctcaaaaacccaaggtagttctggataga
ataaatgatttttactctaagcaattttcaaatgtaggaagaagtattcattatttagct
gtagcagctacaaatttatatgaaaatacaaggacttctgttcaaaagtatataaatgca
aaagataaaaatgagatcgtatttaccaaaggtgctacggaggccttgaatttagtagct
aataccctgggtcaagcaatcttggaacctaatgatgaaattttaattacagaattagag
catcattcaaattatgttccatggcattttttaagaaaatcaaaaaatattaaaataaaa
tttgcagagattaatgaagatggggatataccaatagaaaatatagagaaagaaattaca
gaaaaaactaaagtaatagctataactcatttatcaaatgttactggcgcagttttacca
atcaaagagataactcaattagcgcactcaaaaggtattgtcgtcgtagtagatggatgt
cagggaggaccacatttaaaattagatatgcaagacttagattgtgatttttatgcaata
tcatgtcataaaatgtacggtccaacaggtcttggagttttgtacgggaaaaagaaatgg
ttagagcaacttccaccatatcaagggggcggaggtatgattaatgaagtaaaaaaagat
aggatttcttatggagatcttccaaataagtatgaagccggaaccatggctacagcacaa
gtcattgcgtttaatgaatcaataaagtttttggaaagtattggaattgaaaatgtaatt
aagcatgaaaaagaattaatagaatacggccaagaaattttaaaaaagaataattctgtg
aaattaattggaaatcctaaagagcgaggtggagtattatcttttactgtagaaggagtt
catccacatgatattgcaactattctagatgaaactggggttgctataagagcaggtcat
cattgttgtcaaatacttcatgacaaattaggcatacctgcaagtgcacgtgcatcacta
ggagtttataacactaaagatgacttagataaattgaatgaaggtattaataattgtaaa
aaagtatttgatttaaaatga
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