Candidatus Pelagibacter sp. RS39: B5L73_05890
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Entry
B5L73_05890 CDS
T11425
Name
(GenBank) ABC transporter permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pela Candidatus Pelagibacter sp. RS39
Pathway
pela02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pela00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
B5L73_05890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pela02000
]
B5L73_05890
Enzymes [BR:
pela01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
B5L73_05890
Transporters [BR:
pela02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
B5L73_05890
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ARJ48307
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Position
1094660..1096390
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AA seq
576 aa
AA seq
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MTNLEILLDLYRRYTKKHLTKIFLSIFFSILVAGSTAMIAYLLDPAIEKIFIEKNQKLML
IIPIIILITFAVKGTSLYLAKTLLIQVGGEVQKVLQLQIMQSILKSNVEKMNKKHTGKFL
SHISYDAGMVMKLVTDTILLFSKDSLTLIGLIGVMFYQNWKLAIFAIIMIPLASIAAKSL
GKRIGKVTTESQEVSGFLSSFFIEIIKNHKVIKIFQTEEYENKRLTKIINTFKDKVVKIQ
TVMTRATPIMETLTGLMIGGLIYYSGSLIIKGELELNNFFSFLAAMMLAYQPVRTLATLN
MGIHQGLSAAKRLLPIIDEDNSDKNSDKHLKIDQGNVNFKDVSFKYSESLKNVLNKVNLE
FKSDQMTALVGHSGAGKSTILNFIPRFYEPLSGKIYIDNQPIDEHSLSSLRENISLVSQD
ISLFDDTIKNNIKYSRLTASDEEIIEAAKLSNCEDFVKSMPNGYDTVIGENGVKLSGGEK
QRLSIARAILKKSKIILLDEATSSLDAETEDKIQKAINYLTKNKTTIVIAHRLSTILNSD
KIYVIDSGSVVAEGNHNELLNTSSIYKNFYDKQLKS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgactaatttagaaattttattagatctttatagaagatatacaaaaaaacacctaaca
aaaatttttctttctattttcttttcaatattagttgcgggtagtactgcaatgattgct
tacctgcttgatccagctatagaaaaaatttttattgaaaaaaatcaaaagctgatgtta
ataattcctattattattttgattacatttgctgttaaaggcacttctctttatttggca
aaaacattactcattcaagtaggcggtgaagttcaaaaagttcttcaattacaaattatg
caatcaattttaaaatcaaatgttgaaaaaatgaacaaaaaacatacagggaaatttctt
tcacacatcagttacgacgcgggtatggttatgaaacttgtaacagacacaattttatta
ttctcgaaagatagtttgacattgattggtttaataggtgtgatgttttatcaaaattgg
aagctagcaatattcgcaataataatgatacctcttgcatccattgctgcaaagtctttg
ggcaaaagaattggcaaagtaactacagaatctcaagaagtctctggttttttaagttca
ttttttattgaaattatcaaaaatcataaagttattaaaatttttcaaacagaggaatat
gaaaataaaaggttaactaaaattataaacacctttaaagataaagtagttaaaatccag
actgttatgactagagcaacaccaataatggaaactctaactggcttaatgattggagga
ttaatttattattcaggtagtttgataataaaaggtgaactagaattgaataattttttt
tcatttttggcagctatgatgttggcttaccagcctgtgagaacattagcgactttgaac
atgggtattcatcaaggtttatcagctgccaaaagattgttgccaattattgacgaggat
aatagcgacaaaaattctgataaacaccttaaaatcgatcaagggaacgtaaactttaaa
gacgttagttttaagtattctgaaagtttaaaaaatgttttaaataaagtgaatttagaa
tttaaaagtgatcaaatgactgcgctagttggtcatagtggtgcaggaaagtctactatt
ttaaattttatcccaagattttatgaaccattaagtggaaaaatttatatagataatcaa
ccgattgatgaacactcactctcatctttaagagaaaatatttcattagtaagtcaggat
atatctttattcgatgatactattaaaaataatataaagtattctagacttacagcttca
gatgaagaaatcattgaagctgcaaaattatctaattgtgaagattttgtaaaaagtatg
ccaaatggatatgacactgtgataggtgaaaatggtgttaaattatctggtggagaaaaa
caaagattatcgattgcaagagcaatacttaaaaaaagtaaaataattctattagatgaa
gccacctcttctttagacgcagaaacagaggataaaattcaaaaagcaattaattacctt
acaaaaaataaaacgacaattgttatagcccatagattatctacaattctaaattcagac
aaaatttacgtaattgactcaggaagcgtagttgcagagggaaatcataatgaactatta
aatacttcatctatttataaaaatttttatgataagcaattaaaatcttaa
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