Paenibacillus elgii: ACJ7K1_13940
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Entry
ACJ7K1_13940 CDS
T11011
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pelg Paenibacillus elgii
Pathway
pelg02024
Quorum sensing
pelg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pelg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACJ7K1_13940 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACJ7K1_13940 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pelg03019
]
ACJ7K1_13940 (hfq)
03036 Chromosome and associated proteins [BR:
pelg03036
]
ACJ7K1_13940 (hfq)
Messenger RNA biogenesis [BR:
pelg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACJ7K1_13940 (hfq)
Chromosome and associated proteins [BR:
pelg03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ACJ7K1_13940 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
XOK64159
LinkDB
All DBs
Position
3082742..3082981
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AA seq
79 aa
AA seq
DB search
MNKSINIQDTFLNQLRKENIPVTVYLTNGFQIRGVIRAFDNFTIIIDSEGRQQMVYKHAI
STFTPQRSVSLMQQENSTE
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtcaatcaacattcaggacacgtttttaaaccaattgcgcaaggagaacatt
ccggtcaccgtttatttgaccaatggatttcaaattcgcggcgtcattcgcgcgttcgat
aactttacgatcattatcgacagcgaaggacgccagcaaatggtgtataagcatgcgatt
tcgacctttacgccgcagcgttcggtgtcgctcatgcagcaggaaaatagcaccgaatag
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