Paenibacillus elgii: ACJ7K1_15735
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Entry
ACJ7K1_15735 CDS
T11011
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pelg Paenibacillus elgii
Pathway
pelg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pelg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACJ7K1_15735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pelg03019
]
ACJ7K1_15735
Enzymes [BR:
pelg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACJ7K1_15735
Messenger RNA biogenesis [BR:
pelg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACJ7K1_15735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
DsrH
Motif
Other DBs
NCBI-ProteinID:
XOK64489
LinkDB
All DBs
Position
complement(3468908..3470209)
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AA seq
433 aa
AA seq
DB search
MTFEQLKLIPPILKALAKENYTQPTPIQEQAIPPVLAGRDLFGCAQTGTGKTAAFLLPII
QLLSAQQGRPSGKRVIRSLILTPTRELAIQISDNFKSYGRFLNLRSAVILGGVSQKAQEQ
ALEQGMDILIATPGRLIDLMNQGFADLRHVQILVLDEADRMLDMGFIHDMRRIIAKLPAK
RQTLFFSATMPPEITSLVDSLLTNPMKIEITPVSSTAERIKQTLYFVDKPNKLPLLIDLL
QDKSIESALVFTRTKHGADRLVRGLTKAKITAQAIHGDKSQNARQAALNNFKQGVTRMLV
ATDIAARGIDIEELSHVINYNLPNIPETYVHRIGRTGRAGLSGIAISFCEYEEIPYLKDI
EKLIKQKIPVIGDHPYPMTINESTPTAVRETRTSVTSSEDRVTRGHREDTNRNDSAGRKG
TFEGPGRRWKRRS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaacaattgaaactgattccccccattcttaaagcgttggccaaggaaaat
tatacacagcccactcccatacaggagcaggcaattccgccggtgctggcgggccgtgat
ttgttcggctgcgctcagacggggaccggcaagacagcggcgttcttgctgccaattatc
caactgctgagcgcgcagcagggacgaccgagcggcaagcgcgtcattcgttcgctgatc
ctgacgcctacgcgagagctggccattcagatatccgacaactttaaatcttacggacgc
tttttgaatctgcgaagtgccgtgattttaggcggcgtttcgcaaaaagcacaggagcag
gcactggagcaaggcatggatatactgatagcgacgcccggtcgactaatcgacctgatg
aaccaagggttcgccgatctgcgtcacgtgcagattctcgtgttggacgaagcagaccgc
atgctggatatgggcttcattcacgacatgagaaggatcatcgccaagctgcctgccaaa
cgacagacgctgttcttttcggcgacgatgccgcccgagatcacttctctggtagactca
ctgctgacgaatccaatgaaaatcgaaattacgcccgtttcctcgacggcggagcggatc
aagcagacactctactttgtggacaagccgaataagctgccgctgttgatcgacctgcta
caagacaagtcgatcgaaagcgcgcttgtgttcacccgtacgaagcatggcgcggatcgg
ctggtgaggggcttgacgaaggcgaagattaccgcgcaggcgattcacggcgacaagtcg
cagaacgcccgccaagctgcgctgaataacttcaagcaaggtgtgactcgcatgctggtg
gcgacagacattgcggcccggggcatcgacatcgaggagctgtcgcacgtcattaactac
aatttgccgaatatcccggagacgtatgtacatcggatcggccgcaccggacgagcggga
ttaagcggaatagcgatttcgttttgcgagtacgaggagattccttatctgaaagatatc
gagaagctgatcaagcagaagattccggtgatcggggatcatccgtatccgatgactatt
aatgaatcgactccgacggcagttagggagaccagaaccagcgtcacatcttccgaggat
cgtgtcacccgcggccatcgcgaagacactaatcgaaacgactctgccggcagaaaagga
accttcgaaggtcccggccgccgctggaaacggcggtcctaa
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