KEGG   Paenibacillus elgii: ACJ7K1_18565
Entry
ACJ7K1_18565      CDS       T11011                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
pelg  Paenibacillus elgii
Pathway
pelg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pelg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACJ7K1_18565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pelg03019]
    ACJ7K1_18565
Messenger RNA biogenesis [BR:pelg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACJ7K1_18565
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: XOK58582
LinkDB
Position
complement(4150924..4152600)
AA seq 558 aa
MSKKNIDKLTIFALGGVGEIGKNMYVVQYANDIVVVDCGLKFPEEDMLGIDIVIPDISYL
TENRDKVRGIVITHGHEDHIGGLPYVLKHLNVPVYGTRLTMGLIEMKLKEANLLGETKRI
VITAESELKLGCMTATFFKTNHSIPDSVGVCLETPEGNVVHTGDFKFDQTPVNEQYADLH
QMAAIGRRGVIALLSDSTNAERPGYTGSERSVGAEIEDVFRKAKQRVVIATFASNIHRIQ
QVIDACESTRRKLTVIGRSMVNVVSIASELGYLRVPDGMLIEPEEVNKLAADRVAILSTG
SQGEPMSALTRMARSTHRKMDILPGDTVIIAATPIPGNERYVGRTVDELMRIGAHVIYGP
GSITGVHVSGHGSQEELKLMLNIMRPKYFIPIHGEYRMLRQHGMLAESVGIAREDIFIVD
NGDTVEIQDGVARKGSKVPAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQD
GTILSGPDIISRGFVYVRESEGLLEEANRIVTSTLHRLMNENVNEWASLKTHVKDALGRF
LYEQTRRRPMILPIIMEV
NT seq 1677 nt   +upstreamnt  +downstreamnt
ttgtccaagaaaaatatagacaaattaacgatttttgccctgggcggcgtgggtgaaatc
gggaagaacatgtatgtcgttcaatatgcgaacgatattgtagtcgtagactgcggattg
aaatttccggaggaagatatgctcgggatcgatatcgtcattcccgatatttcttacttg
acggaaaatcgcgataaagtgcgcggaatcgtcattacacacggccacgaggatcatatc
ggcggcttgccttacgttcttaagcacctgaacgttccggtgtatggaacaaggctgacc
atgggtttgatcgagatgaagctgaaggaagcgaatctgctcggtgaaacgaaacggatc
gtcattacggccgaatcggaattgaagctcggctgcatgacggcaacgttctttaagact
aaccacagtattcccgactcggtaggagtatgcctggagacgccggaaggcaacgtggtt
cataccggtgacttcaagttcgatcagacgccggtcaacgagcagtacgcggatcttcac
cagatggcagcgattggccgcagaggcgttattgcgctgttatcggatagtaccaatgcg
gagcgtccgggttataccggttcggagcgcagcgtaggcgcggaaatcgaagacgtattc
cgtaaagcgaagcagcgtgtcgttatcgcaaccttcgcctccaatattcaccggattcag
caggtcattgacgcgtgcgaatcgacccgccgtaagctgaccgtgatcgggcggagcatg
gtgaatgtcgtgagcatcgccagcgaactgggttacttgcgcgttccggatggcatgctg
atcgaaccggaggaagtaaacaaactcgcggccgaccgcgtagccattttatctacaggg
tcccagggcgagccgatgtcggcgctgacccggatggcccgctccacgcatcgcaagatg
gacattttgcccggcgacaccgttatcatcgccgctacgccgattcccgggaatgaacgg
tatgtagggcgtacagtggacgaattgatgcgcattggcgcgcatgtcatttacgggcct
ggttcgatcacaggggtacacgtatctggacacggcagccaggaagaattaaagctgatg
ctgaatatcatgcgtccgaaatattttatcccgattcacggggagtaccgaatgcttcgc
cagcacggaatgcttgccgaatcggtcggcatcgcgcgcgaagatatttttatcgtggat
aacggcgatacggtggaaatccaggacggcgtggcccgcaaaggctccaaagtgccggca
ggcaacgttctcatcgacggccttggcgttggcgatgtcggcaacattgtgctgcgcgac
cgcaaactgttgtctcaagacggcattctggtcgtcgtcgtaacgctcagcaagcaggat
gggacaatcttgtccggtccggacatcatctcccgcggctttgtatacgtgcgggagtcg
gaaggattgctggaagaagcgaaccggatcgtgacgagcacgctccatcgcttaatgaac
gaaaatgtcaatgaatgggcttcgcttaaaacccatgtcaaagacgcgcttggccgattt
ttgtatgagcaaacccgaagaagaccgatgattttgccaatcatcatggaagtgtaa

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