Paenibacillus elgii: ACJ7K1_18610
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Entry
ACJ7K1_18610 CDS
T11011
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pelg Paenibacillus elgii
Pathway
pelg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pelg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACJ7K1_18610 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pelg03019
]
ACJ7K1_18610 (pnp)
03016 Transfer RNA biogenesis [BR:
pelg03016
]
ACJ7K1_18610 (pnp)
Enzymes [BR:
pelg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACJ7K1_18610 (pnp)
Messenger RNA biogenesis [BR:
pelg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACJ7K1_18610 (pnp)
Transfer RNA biogenesis [BR:
pelg03016
]
Prokaryotic type
tRNA degradation factors
ACJ7K1_18610 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_RRP5
OB_RRP5_4th
Cas8b_C
Motif
Other DBs
NCBI-ProteinID:
XOK58590
LinkDB
All DBs
Position
complement(4160749..4162851)
Genome browser
AA seq
700 aa
AA seq
DB search
MEKQVQMDLGGRPLILETGRLAKQANGAVVARYGETVVLCTVTASAEPKDLDFFPLTVNY
EERLYSVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQIVAIVMSVDQE
CAPEIAAMIGTSAALSISDVPFNGPVGGVIVGRVDGQFVINPTLEQSEKSDIHLVVAGTK
DAIMMVEAGAEEVPEEVMLEAIMFGHDEIRKIVAIQEQFVQEVGKPKMEVKLHSVDSDVN
QAVREFAQARLVEAVKIPEKHARQDAIDAINNEAKEHFAAVYAETPEKMADVKETLYDIV
KEEVRRLITHDKVRPDGRGLDEIRPIECDINLLPRTHGSGLFTRGQTQALSVCTLGALGD
VQILDGLDLEESKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALEPVIPSEVDF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGEHYSILTDI
QGMEDHLGDMDFKVAGTAKGVTALQMDIKIDGIDRAILTDALEQAKKGRMHILNKMLDRI
SQPKSDLSPYAPKIVTMQINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASSN
SEMNEKARQIIEGIVREVIVGETYLGTVKRIEKFGAFVEILPGKEGLVHISQLSTERVGK
VEDVVKIGDTITVKVTEIDNQGRVNLSRKAVLTAQVPAQT
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaagtgcagatggatctcggcggacgtccgttgattctggaaaccggacgt
ctggcgaagcaggcgaacggcgctgtcgttgcgcgctacggcgaaaccgtcgtgctttgt
acggtaacggcttccgccgagccgaaagatttggattttttccctctaaccgtcaactat
gaggagcgtctttattcggtaggtaaaatccccggaggctttattaaaagggaaggacgc
cccagcgagaaagcgattttgtccagccgcttgacagaccgtccgattcgtccgttgttt
ccggaaggattccgcaatgacgtgcagatcgttgcgatcgtcatgagcgtggatcaggaa
tgcgcgccggaaattgcggccatgatcggaacctccgcagcgctcagcatttctgacgtg
ccgtttaacggtccggtgggcggggttattgtcggacgagtggacggacagttcgtcatt
aatccgacccttgagcagtcggaaaaaagcgatatccacctcgtcgtggcaggcacgaag
gatgctatcatgatggttgaagccggtgcggaagaagtgccggaggaagtgatgctggaa
gcgatcatgttcggtcatgacgaaatccgcaaaatcgttgccattcaggaacaattcgtg
caggaagtcggcaagccgaaaatggaagtcaagcttcacagcgtcgatagcgacgtaaac
caagcggttcgtgagttcgctcaagcccgtctggtggaagcggtcaaaattccggagaag
catgcaagacaagatgcgatcgacgcgattaacaatgaagcgaaggagcattttgccgcg
gtttacgccgaaacgccggaaaaaatggccgacgtcaaagaaacgctgtacgatattgtg
aaagaagaagtgcgccgcttgattacgcacgacaaagttcgtccggacggacgggggctg
gatgaaatcagaccgatcgaatgcgatatcaacctgctgccgcgtacgcacggctccggt
ttgtttacccgcggccaaacgcaggcactcagcgtatgtacgctcggagcgcttggcgac
gtgcaaattctcgacggtctcgacctggaagaatcgaagcggtttatgcatcattacaat
ttcccgccgttcagcgtaggcgaagctcgtccgctgcgtgcgccgggtcggcgcgaaatc
ggacacggggcactcggagaacgtgcgctggagccagttattccttctgaagtcgacttc
ccgtatacgatccgcctggtttccgaggtgctggaatcgaacggttcgacttcgcaggca
agcatttgcgcgagtacactggcgatgatggatgcgggcgttccgatcaaagctccggta
gcgggcgtagccatgggtctgatcaaagacggagagcattactcgatcttgacggacatc
caggggatggaagaccacctcggcgatatggactttaaagtggccggtaccgccaaagga
gttaccgcgctgcagatggatatcaaaatcgacggaatcgaccgggccattttgacggat
gcgttggagcaggcgaaaaaaggccgcatgcatattttgaacaaaatgctggatcgcatt
tcgcagccaaaatcggacctgtcgccttatgcgccgaaaatcgtcacgatgcagatcaac
ccggacaagatccgcgatgtcatcggagcaggcggcaaaatcatcaacaagatcatcgaa
gaaaccggcgtaaaaatcgacatcgagcaggatggccgcgtcttcatcgcttcgtccaac
agcgagatgaacgaaaaagcgcgtcaaatcatcgaaggtatcgtccgtgaggtcatcgtt
ggggaaacgtacctcggcaccgtgaagcggatcgaaaagttcggcgccttcgtcgaaatt
ttaccgggcaaagaaggcttggtgcacatttcccagctgtctaccgagcgggtaggcaag
gtggaagatgtcgtcaagatcggcgatacgattacggtgaaagtaaccgagatcgacaac
caaggccgtgtcaatttatcgcgcaaagcggtattgacggcgcaagttccagcccaaacc
taa
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