Paenibacillus elgii: ACJ7K1_18920
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Entry
ACJ7K1_18920 CDS
T11011
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pelg Paenibacillus elgii
Brite
KEGG Orthology (KO) [BR:
pelg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pelg03032
]
ACJ7K1_18920 (topA)
03400 DNA repair and recombination proteins [BR:
pelg03400
]
ACJ7K1_18920 (topA)
Enzymes [BR:
pelg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACJ7K1_18920 (topA)
DNA replication proteins [BR:
pelg03032
]
Prokaryotic type
DNA Topoisomerases
ACJ7K1_18920 (topA)
DNA repair and recombination proteins [BR:
pelg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACJ7K1_18920 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
DUF7340
Toprim_3
Auto_anti-p27
Lar_restr_allev
Zn_ribbon_3
DUF7078
Toprim_2
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
XOK58648
LinkDB
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Position
complement(4221570..4223672)
Genome browser
AA seq
700 aa
AA seq
DB search
MADSLVIVESPAKAKTISKYLGSKYIVKASMGHIRDLPKSQIGVEVQKNFEPKYITIRGK
GSVLKELKDASKRVKKVYLAADPDREGEAIAWHLAHYLELSDQEACRVVFNEITKQAVKD
AFKTPRKINQDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKLIYDREN
EIKAFVPEEYWTITAKLSSGKADFDAKFYSVDGEKKELKNEAEVNAVLASLQKAEFIVSE
VKEKERLRNPSPPFITSSLQQEAARKLNFRAAKTMSVAQQLYEGIDLGSEGTVGLITYMR
TDSTRISPVAQEEAKDYIVQKFGESFYPETPRVYTKKNTNAQDAHEAIRPSSVLREPDQI
KQHLSRDQYRLYKLVWERFVASQMASAVLDTMTVDLTAANTIFRAVGSKVKFHGFMKVYV
EGNDDAAVDTGDDDKLLPPLKEGDKVKKQQIDPKQHFTQPPPRFTEARLVKALEEMGIGR
PSTYAPTLETIQKRGYVAIEEKKFVPTELGELVIQQMIEFFPEILDVDFTAHMEEGLDHI
EEGKEDWVRVLSEFYESFEKRLEVAEEEMEKVEIQDEVSDEICEKCGRHFVYKMGRFGKF
LACSGFPDCRNTKPIVKDTGVTCPNCHEGKIIERRSKKGRIFYGCDRYPECDFVSWDKPV
GYPCPKCGAMLVEKRNKSGTFVQCVSCDFREEAKEEQDQD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcgttagtcattgtggagtcacccgcaaaagccaaaacgatcagcaaatat
ttaggaagcaaatatattgtaaaagcatcgatgggacatattcgggatttgccgaagagc
cagatcggagtcgaagttcagaaaaactttgaaccgaaatatattacgatccggggcaaa
ggctccgtactcaaagagcttaaagatgcaagcaagcgcgtgaaaaaagtatacctggcg
gcggaccctgatcgcgaaggcgaggcgattgcctggcacctggctcattatcttgagctc
tccgatcaggaggcgtgccgtgtcgtgttcaacgagatcacgaagcaggcggtcaaggat
gcattcaagaccccccgcaaaatcaatcaggatctggtgaacgcgcagcaggcccggcgc
atactggaccggctggtaggctacaaaatcagcccgctgctttggaagaaggtcaagaaa
gggctatccgccggccgggtgcaatccgtggctgtaaagctgatctatgaccgcgagaat
gagattaaagcgttcgtgcccgaagagtattggaccattacggccaaattgtcctcggga
aaagcggattttgatgcgaagttttacagcgtagacggcgaaaagaaagaactgaagaac
gaagcagaagtgaacgctgtcctggcctcgcttcagaaggccgagtttattgtaagcgaa
gtcaaggaaaaggaacgtctacgcaatccgtcccctcctttcattacaagctcgcttcag
caggaggcggcccggaaattaaactttcgcgcggccaagacgatgtcggtagcgcagcaa
ttatatgaaggaatcgatctcggcagcgaaggtacggtcggtttgattacgtatatgcgt
accgattcgacgcggatttctcctgtagcccaggaagaagcgaaagactatatcgtgcaa
aaattcggggagtccttttatcccgaaacgccgcgcgtttatacgaagaaaaatacgaac
gcgcaggatgcgcacgaagcgattcgtccgagctcggtgctgcgcgagccggatcagatc
aaacagcacttgagccgcgatcagtatcgcctctacaagctcgtttgggaacgcttcgtc
gcgagccagatggcttctgcggttctggatacgatgaccgtcgatttgacggccgccaat
accattttccgggccgtcggttcgaaggtgaagttccacggctttatgaaggtgtatgtg
gaaggaaacgacgatgctgcggtagatacaggggatgacgataagctgctcccgcccctg
aaagaaggggataaggtaaaaaagcagcagatcgacccgaagcagcattttacccagcct
ccgccgcgttttacggaagcgcgattggttaaggcgttggaagaaatgggcatcggacgt
ccgagcacctacgctccgaccctcgaaacgatccaaaagcgcggttatgtagctatagaa
gaaaagaaatttgtgccgaccgagcttggcgagctggttattcagcagatgatcgaattt
tttccggaaattttggacgtggatttcaccgcccatatggaagagggactggaccacatc
gaggaagggaaagaagattgggtccgcgtgctgagcgagttttacgagtcgttcgagaag
cggcttgaagtggctgaggaagagatggagaaagtcgagattcaggacgaggtttccgat
gagatttgcgagaaatgcggccgtcatttcgtctacaagatgggacggttcggcaagttt
ctggcctgctccggtttcccggattgccgcaatacaaagccgatcgtcaaggataccggc
gtcacctgtccgaattgccacgaagggaaaatcatcgaacgccgcagcaaaaaagggcgc
atcttctatggatgcgaccgctatccggaatgcgatttcgtctcgtgggataaaccggta
gggtacccgtgtccgaagtgcggcgcgatgcttgtagaaaagcgaaacaaatcaggaacg
ttcgtccaatgcgtgtcctgcgactttagagaagaagcgaaagaagagcaagatcaggac
taa
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