Paenibacillus elgii: ACJ7K1_20730
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Entry
ACJ7K1_20730 CDS
T11011
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pelg Paenibacillus elgii
Brite
KEGG Orthology (KO) [BR:
pelg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pelg03400
]
ACJ7K1_20730 (addB)
Enzymes [BR:
pelg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACJ7K1_20730 (addB)
DNA repair and recombination proteins [BR:
pelg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ACJ7K1_20730 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
XOK58988
LinkDB
All DBs
Position
complement(4622193..4625873)
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AA seq
1226 aa
AA seq
DB search
MAFQFVLGRAGSGKTTFCLNAIKQKLLEQPDGAPLIWLVPEQASFQTEYALVSSPELRGT
LRAQVLSFRRLAWRVMQEVGGTSRLPIDETGKKLLLHRILHKQKDRLCRFQASAGQTGFL
DKLNELFSELKRYCISPDQLEQFYSSRFVSDGDASGTLPEKLHDLQLLYGEFEAELSKLY
LDGEDYLTLLARQVGESAYLRGAEIWVDGFHGFTPQELAVLEQLALYAGRVTMTLCLNRP
YAGGEQPHELDLFHPTARTMKTLRERLDALEVETEASIVLPSSPPARFREAPSLGFLEAQ
WEERVKKPFRPEPGDSRPPAVRISAAASRRAEVEALARDVVKLVRDEGLRWRDIAVSVRN
MESYGELISGTFADYGIPHFLDHKRPVVHHPLVELIRSALETINHYWKYEAVFRAVKTGF
FLPFGEAREREDGLIIDRHALDQLENYVLAFGIQGYKWMNDWTYSYRTTLEQDETQPSEA
DEAFLRKLNACRRLVAEPLGALQERMRRKATVLQRVEALYGLLEQLRVPERLEAWSQASL
ARGQAEKAREHAQVWERVVDMFDQLAELMGDESMTSETFAELVDTGLESIKLGHVPPTLD
QVLVGSMDRTRSGQVKHMFVLGVSEGVMPAKMPESGVLSEAEREQLAGNGLQTAEGSRRR
LLDESFLIYCAFCAPSHGLWLSYPLADEEGRSLLPSDVIRQVKRMFPSLQERLLLNDPAP
DSHAGEQMEYVARPDKALSLLMVQLKQWMGGAPMNAVWWSVYNWFARQPEHALKLSRMVQ
ALLYSNRAKELSAETSRELYGESIQTSVSRMERFVACPFSQFVSHGLRLKERRIFRLEAP
DIGQLFHAALTKFAEQAEREGFDWGGLTAAECEQRAALVVDALAPKLQGEILLSSKRYSY
IARKLKQVIGRAALMLGEHARRGQFRPIGLEVGFGSGQPIPPLLYDLDNGVRMELRGRID
RIDRADTEQGTLLRVIDYKSSAKALNMTEVYYGLSLQMLTYLDVILTHAPIWLGHEAQPA
GVLYFHVHNPVLNARNGLSAQEIDSELKKRFKMRGLLRADADTVRLMDGGLAEAGGHSDL
LPVALKTDGSFYKTSSVASEEQWDTVRRYVKRTIREIGTSLTDGTIEIAPYRMGQATACT
MCAYRSVCQFDTQLDGNAYKQLTPIGKDRVWEMMEQKAASAPRSAGAAYRPRAAAKRQSA
EESRTAEPQEENVLEEPDNENGGNEQ
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcaatttgtgctcggccgagcgggcagcggcaaaacaacgttttgcctgaac
gcgatcaaacagaagctgctggagcagccggacggtgcgccgctgatctggctcgtgccg
gagcaggccagctttcagacagaatatgcgcttgtgtcctccccggagctcagaggcacg
ctgcgcgctcaagtgctcagcttccggcgccttgcttggcgtgtcatgcaggaagtgggc
ggtacctcgcgtctgccgatcgatgaaacaggcaaaaaactgctgcttcaccgcatttta
cataaacaaaaagaccgtctgtgccgttttcaagcgtcggcaggacaaacgggctttctg
gataaattgaacgaactgttttcggagttgaaacggtactgtatcagccccgatcagctt
gagcagttttattcgtcgcgctttgtttccgacggcgatgcttcgggcacgcttccggaa
aagctgcacgatttgcagctgctgtacggcgaattcgaggcggagttgtccaagctgtac
ctggacggggaagattatttgacgctgctggcacgccaggtcggcgaatcggcgtattta
cggggcgcagaaatatgggtcgacgggtttcacgggtttacacctcaggagcttgccgtc
ctggagcagcttgccttgtacgccgggcgggttacgatgacgctctgcctgaaccgtccg
tatgcgggcggggagcagccgcacgagctggacttgtttcatccgaccgcccggacgatg
aagacgctgcgggaacggctggatgccttggaggtggaaaccgaagcctcgatcgttctg
ccgtcgtcgcctccggcaaggttccgggaggcgccgtcgctcggctttttggaggcgcaa
tgggaggagcgggtgaaaaagccgttccgacccgagccgggggacagccggccaccggcc
gtgcgcatatcggcggcggccagccggagggcggaggtggaggcgctagcccgggacgtc
gtcaagctcgtccgcgacgaagggcttagatggcgggacatcgccgtgtcggtccgcaac
atggaatcgtacggcgagctgatctcgggtacgtttgccgactacgggatcccgcacttt
ttggatcataagcggccggttgtgcaccacccgctcgtcgaattgattcgctctgcgctc
gaaacgatcaaccattattggaaatacgaagcggtttttcgcgcggtcaaaaccggattt
ttcctgcctttcggcgaggcgagagagcgggaggacggtttgatcatcgaccggcatgcg
ttggaccagctcgaaaactatgtgctggcgttcggcattcaaggatacaaatggatgaat
gactggacgtattcgtatcggaccacgctcgaacaggacgagacgcagccgagcgaggcg
gacgaggcgtttctgcgcaagctcaatgcctgccgcaggctggtggcggagccgctcggg
gcgctgcaggagcgcatgcgccggaaagcgacggtgcttcagcgggtagaggcgctgtac
ggcctgctggagcagcttcgggtgccggagcggctggaggcttggagccaggcgtccctc
gctcggggacaagcggagaaagctcgggagcacgcccaagtgtgggagcgggtcgtcgat
atgttcgatcagcttgcggagctgatgggagacgagtcgatgacttcggagacgttcgcg
gagctggtggacacgggactcgaaagcatcaagctcggccatgtcccgcccaccctcgac
caggtgctggttggcagcatggaccggacccgttccggtcaggtcaagcacatgttcgtg
cttggcgtgagcgaaggggttatgcccgccaaaatgcccgaaagcggcgtcttgtcggaa
gcggagcgcgaacagttggccggaaacgggctgcaaaccgccgaagggagccgaaggcgg
ctgcttgacgaatcgttcttgatctactgcgcgttttgcgcgccttcgcacggattatgg
ctaagctatccgctggccgacgaggaaggaaggtcgcttctgccttcggacgtgatccgg
caggtgaagcggatgttcccgtcgctgcaggagcggctgctgttgaacgatccggcgccg
gacagccacgccggcgaacaaatggagtacgtcgcccgcccggataaggccttatccctg
ttgatggtgcagctaaagcagtggatgggcggggctccgatgaacgccgtctggtggtcg
gtgtacaactggttcgcccgccagcccgaacacgccctgaagctgtcgcggatggtgcag
gcgctgctctattcgaaccgggcgaaggaattgagtgccgaaacgagccgcgagctgtac
ggggaaagcatccagacgagcgtatcgcggatggagcgcttcgtcgcgtgtccgttctcc
cagttcgtctcgcacgggctgcggctgaaggaacgccgtatttttcgtttggaagcgccc
gatatcgggcagctgtttcacgcagcattgaccaagtttgcggagcaggcggagcgcgaa
gggttcgactggggcggcttaacggctgcggaatgcgagcagcgggcggcgctagtcgtc
gatgcgcttgcgccgaagctgcagggcgaaattttgctcagctccaaacggtattcgtat
attgcgcgcaagctcaagcaggtgatcggacgggcggcgctgatgctgggcgagcacgcc
cggcggggacagttccggccgatcgggctggaggtcggctttggaagcggacagccgatc
ccgccgttgctttacgatttggacaacggcgtgcgcatggagctgcggggaagaatcgac
cggatcgaccgggcggataccgagcagggaacgctgctgcgggtgatcgactacaagtcg
agcgccaaggcgctgaatatgaccgaagtgtattacggcttatcattgcaaatgctcacg
tatttggacgtcattctgacgcatgcgccgatctggctcggccacgaagcacagcctgcg
ggcgttttgtacttccatgtacataatccggtgttgaacgcaagaaacgggctttccgcc
caagagatcgacagcgagttgaagaagcggttcaaaatgagaggcttgcttcgcgccgac
gcggatacggtccggctgatggacggagggctggcggaagccggagggcattccgacctg
ctgccggtagcgctcaagacggacggcagcttctataaaacgtcgtcggtcgcctccgaa
gaacagtgggacaccgttcggcggtacgtcaagcggacgatccgcgagatcgggacgtcg
ctgacggacggcaccatcgagattgcgccttaccggatgggccaagcgacggcctgcacg
atgtgcgcgtaccgttccgtatgccaattcgacacgcagctcgacggcaatgcgtacaag
cagcttacgccgatcggcaaagaccgggtatgggaaatgatggagcaaaaggctgcttcc
gctccccgctccgcaggagcggcttatcggccgcgcgccgctgcgaaacggcagtctgcg
gaagagagccggacagcggagccgcaggaagagaacgtcctggaagagccggataacgag
aatggagggaacgaacaatga
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