Paenibacillus elgii: ACJ7K1_29355
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Entry
ACJ7K1_29355 CDS
T11011
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pelg Paenibacillus elgii
Pathway
pelg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pelg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACJ7K1_29355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pelg03019
]
ACJ7K1_29355
03009 Ribosome biogenesis [BR:
pelg03009
]
ACJ7K1_29355
Enzymes [BR:
pelg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACJ7K1_29355
Messenger RNA biogenesis [BR:
pelg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACJ7K1_29355
Ribosome biogenesis [BR:
pelg03009
]
Prokaryotic type
rRNA helicases
ACJ7K1_29355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_19
SecA_DEAD
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XOK60575
LinkDB
All DBs
Position
6515914..6517569
Genome browser
AA seq
551 aa
AA seq
DB search
MKKNNFALLGIGSDLAEAMQKHGYNEPTPIQSEAIPVALAGHDIIAQAQTGTGKTLAFAL
PILENVNPGNPNVQALIVTPTRELAIQITEEIKRWAPLKGLRVLSAYGGQDVERQIRKLE
GNIHIIVATPGRLLDHLRRETVQLHKLSVLVLDEADQMLHMGFLPEVVEIISVTPSRRQT
LLFSATMPPRIRQLAKEYMRQPVEIEVKSKRVTLDEIEQVVIQTTDRGKLEALCKLIDEE
NPYLAMIFCRTKLRASKLMNELAERGYSCDELHGDLTQAKREQVMKRFREAKIQLLVATD
IAARGLDVEGITHVFNYDIPHDAESYIHRIGRTGRAGQTGKAFTFAAQRDKMYLEQIERG
IKATIAKRSGKAAAERGDAGEGAARGRRGGGADAAASAARGRRTGADAAAGATRGRRSAA
DAAAGAARGRRGGADAAAGAARGRRSGADPAAGAARGRRGGADAAAGAARGRRSGGADAA
ASAARGRRSGADAAAGAARGRRSGADAAAGAARGRRGADAAAGPARGRRTGADSGAARGR
RGGGGGRQRKR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaataattttgccctgctcgggatcgggagcgacttggccgaggccatgcaa
aaacatggatataacgagccgacgccgatccaaagcgaggcgatcccggttgcgcttgcc
ggccacgacatcatcgctcaagcacagaccggcacgggcaaaacgctggcttttgcgctg
ccgattctggaaaacgtcaatcccggcaacccgaacgtgcaggcgctgatcgttaccccg
acccgtgagcttgccattcaaattacggaagaaatcaagcgctgggctccgctcaaaggc
ttgcgcgtgttgtccgcttacggggggcaggatgtcgaacgccagatccgcaagctggaa
ggaaatatacatattattgtagcgacgcccggacggctcctcgatcatttgcgccgggaa
acggtgcagcttcataagctgtccgttcttgtgctggacgaagcggatcaaatgctgcac
atgggcttcctcccggaggtcgtggaaattatttcggtgaccccaagccgcaggcagacg
ctgctgttctcggctacgatgcctccgcgcatccgccagctggccaaagagtacatgcgg
cagccggttgaaatcgaagtgaaatcgaaacgcgtgacgctggacgaaatcgagcaggtc
gtgattcagactacggaccgcggaaagctggaagcgctctgtaaattgatcgacgaggag
aatccgtatttggcaatgattttttgccgtacgaagcttcgagcgagcaagctgatgaac
gagctggcggaacgcgggtattcgtgcgacgagctgcacggagatttgacgcaggcgaag
cgcgagcaggtcatgaagcggtttcgcgaggccaaaatccagctgctcgtagcgaccgat
atcgcggcgcgcggcctcgacgtcgaaggcatcacgcacgtgttcaattacgacattccg
cacgatgccgaaagctacattcaccgcatcgggcggacgggacgcgcagggcagacgggc
aaagcgtttacgttcgccgcgcagcgggataagatgtatctggagcagatcgagcggggc
attaaagcgacgatcgcgaagcggtcggggaaagcagcggcagagcgcggcgacgcgggt
gaaggcgcagcgcgcgggcggcgcggcggcggcgcggatgcggcagcgagcgcagcgcgc
gggcggcgcacaggcgcggacgcggcagcgggcgctacgcgcgggcggcgtagcgccgcg
gacgcggcggcgggcgcagcgcgcgggcggcggggcggcgcggacgcggcagcgggcgca
gcgcgcgggcggcgcagcggcgcggacccggcagcgggcgcagcgcgcgggcgacgcggc
ggcgcggacgcggcggcgggcgcagcgcgtgggcggcgcagcggcggcgcggacgcggcg
gcgagcgcagcgcgtgggcggcgtagcggcgcggacgcggcagcgggcgcagcgcgcggg
cggcgcagcggcgcggacgcggcagcgggcgcagcgcgcgggcgcagaggcgcggacgcg
gcagcgggccctgcgcgagggcggcgcacaggcgcggactcgggcgcagcgcgcggacgc
cggggcggcggaggcggcaggcagcggaagcgctga
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