Pelagibacterium flavum: OF122_00040
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Entry
OF122_00040 CDS
T08676
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00550
Peptidoglycan biosynthesis
pem01100
Metabolic pathways
pem01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OF122_00040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OF122_00040
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pem01003
]
OF122_00040
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pem01011
]
OF122_00040
Enzymes [BR:
pem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
OF122_00040
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
OF122_00040
Glycosyltransferases [BR:
pem01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
OF122_00040
Peptidoglycan biosynthesis and degradation proteins [BR:
pem01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
OF122_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
DUF2680
Motif
Other DBs
NCBI-ProteinID:
UYQ72224
LinkDB
All DBs
Position
9739..11895
Genome browser
AA seq
718 aa
AA seq
DB search
MDLRLSPDDRVDGGPQRKAKGQRAQAGSGSNAPKGGKPRRPQNRKVKKKRSGGMRFIVGL
AYFCFTMMLVGGVAVAGIVVYYGQDLGSSSTWEVPQRPPNIRVLASNGQLLTNRGQTGGE
AIGIHELPPYVGQAVVASEDRRFYSHFGVDPIGLASVGLEMIRAGGITRGASTITQQVAK
NLFLTPDQTLGRKVQEALLAVWLEQNYTKDEILELYLNRVHFGSGSTGIEAAAQTYFGIS
ARNLSLGQAAMLAGILPAPSYYNPRTHPDRASERQRLALANMVREGYITTEQAQAAAQNM
DANITTERVAGTEYYVADWVETLMNDYLGEVNEDVVVSTTLDWDLQKQAEFVIKEAVAEQ
GEELDFSQAAFVAMDTEGRVRALVGGVDYSQSSYNRAVTSRRQPGSAFKPFVYLAALQQG
YTPDTLMVDEPLDYNGWSPENSNGRYVGPVLLRDALAFSINTVAARLAIDIGPENVVETA
YRMGFSSNFQAVPAIALGTQEVSLLELTSAYAPFANGGYGVVPNVITRITTTDGEVLYEE
TPAGPGRILTDEQVGMMNDMLQTGVQAGTGTRAQLGNWPMAGKTGTSQRNRDALFVGYTA
SLVGGVWLGNDDDTPTRVFGGQIPAQIWRDIMTMAHEGLQVAALPGNYVKLQDRVAVPMQ
DTMPATGTPVTIDQIQGQPGQQPAPVPQQQIQPQQQQQPIAVPANDGIGGLLNGLFGG
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcgtctctctcccgatgatcgcgtcgatggcggcccgcagcgcaaggccaag
ggccagcgcgcgcaggccggatcaggctccaatgcgcccaagggtggcaaacctcgtcgg
ccgcagaaccgcaaggtgaagaaaaagcgctcgggcgggatgaggttcatcgtcgggctg
gcctatttctgctttacgatgatgcttgtcggcggcgtcgcggtggccgggatcgtcgtc
tattacggccaggatctgggctcgtcctcgacctgggaagtgccccagcgtccgcccaat
atccgcgttctggcgtccaacggacagcttttgaccaatcgcggccagaccggcggcgaa
gccatcggcattcacgagttgccgccctatgtgggccaggcggtggtggccagcgaagac
cgtcgcttttacagccatttcggcgtcgatccgatcggtctggcctcggtggggctggaa
atgatccgcgcgggcgggattacccgtggcgcgtccaccattacccagcaggtggccaag
aacctgtttctgacccccgaccagacccttggccgcaaggtgcaggaagcgttgctggcc
gtgtggctggagcaaaactacaccaaggacgaaattttagagctctatctcaaccgcgtg
catttcgggtcgggttcgacagggatcgaggcggctgcccagacctatttcgggatttcg
gcgcgcaatctctcgctgggccaggccgcgatgctggcgggcatcctgccggcgcctagc
tattacaatccgcgcacccatcccgaccgggcgtccgagcgtcagcggctggcgctggcc
aacatggtgcgtgagggttacatcaccaccgaacaggcacaggccgccgcccagaacatg
gatgccaacatcactaccgagcgggtggctggcaccgaatattacgtcgccgactgggtg
gaaacgctcatgaacgactatctgggcgaggtgaacgaagacgttgtggtttccacaacg
ctcgactgggacctgcaaaagcaggccgaattcgtcatcaaggaagccgtggccgagcag
ggtgaggaactggacttttcccaggccgccttcgtggccatggataccgagggccgggtg
cgcgcacttgtgggcggggtcgattacagccagtcgagctataaccgcgccgtgacctcg
cgccgtcagccagggtcggccttcaagcctttcgtctatctggccgcgctgcagcagggc
tatacgcccgacacgctgatggtggacgagccgctcgactacaatggctggtcgccggaa
aactccaatggccgctatgtcgggcccgttctgttgcgcgacgcgctggccttttccatc
aatacggtggcggcgcggctggccatcgatatcggcccggaaaacgtggtcgaaacggcc
tatcggatgggtttttcctccaatttccaggccgtgccggccatcgcgctgggcacccag
gaagtctcgctgctcgaactgaccagcgcctacgccccgttcgccaatggcggctatggc
gtggtgcccaatgtcatcacgcggatcacaacgaccgatggcgaagttctatatgaagaa
acgccagccgggccgggccgtatcctgaccgacgagcaggtgggcatgatgaacgacatg
ctccagaccggcgttcaggccgggacgggcacgcgggcccagttgggcaactggccgatg
gcgggcaagaccggcacatcgcagcgcaaccgcgatgcgctgtttgtgggctataccgcg
agccttgtgggtggggtatggctgggcaatgacgacgacacgccgacacgcgtgttcggc
gggcagattcccgcacagatctggcgcgacatcatgaccatggcccatgagggcctgcag
gtcgcggccctgccaggcaattacgtcaagctgcaggaccgcgttgcggtgccgatgcag
gatacgatgccggcgaccggaacgcccgtgaccatcgaccagatccagggccagccgggc
cagcaacccgcgccggtgccccagcagcagatccagccgcaacagcagcaacaacccata
gcggttccggccaatgacgggatcggtgggctgctcaacggactgttcggcgggtag
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