KEGG   Pelagibacterium flavum: OF122_01255
Entry
OF122_01255       CDS       T08676                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pem  Pelagibacterium flavum
Pathway
pem00010  Glycolysis / Gluconeogenesis
pem00020  Citrate cycle (TCA cycle)
pem00260  Glycine, serine and threonine metabolism
pem00280  Valine, leucine and isoleucine degradation
pem00310  Lysine degradation
pem00380  Tryptophan metabolism
pem00620  Pyruvate metabolism
pem00630  Glyoxylate and dicarboxylate metabolism
pem00640  Propanoate metabolism
pem00670  One carbon pool by folate
pem00785  Lipoic acid metabolism
pem01100  Metabolic pathways
pem01110  Biosynthesis of secondary metabolites
pem01120  Microbial metabolism in diverse environments
pem01200  Carbon metabolism
pem01210  2-Oxocarboxylic acid metabolism
pem01240  Biosynthesis of cofactors
Module
pem_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pem_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pem_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pem_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pem00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    OF122_01255 (lpdA)
   00020 Citrate cycle (TCA cycle)
    OF122_01255 (lpdA)
   00620 Pyruvate metabolism
    OF122_01255 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    OF122_01255 (lpdA)
   00640 Propanoate metabolism
    OF122_01255 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    OF122_01255 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    OF122_01255 (lpdA)
   00310 Lysine degradation
    OF122_01255 (lpdA)
   00380 Tryptophan metabolism
    OF122_01255 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    OF122_01255 (lpdA)
   00670 One carbon pool by folate
    OF122_01255 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pem04147]
    OF122_01255 (lpdA)
Enzymes [BR:pem01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     OF122_01255 (lpdA)
Exosome [BR:pem04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   OF122_01255 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 FAD_binding_2 FAD_oxidored GIDA DAO HI0933_like FAD_binding_3 Thi4 AlaDh_PNT_C UDPG_MGDP_dh_N 3HCDH_N Lys_Orn_oxgnase aRib
Other DBs
NCBI-ProteinID: UYQ72448
LinkDB
Position
241398..242804
AA seq 468 aa
MADTFDLTIIGTGPGGYVCAVRAAQLGMKVAVVEKWPSFGGTCLNIGCIPSKALLHASEM
FEEAGHTFPQLGIEVGAPKLNLSAMMAHKDDTVASNTGGIEYLFKKNKITAFRGTGRIAA
QGKVTVTAEDGSATDIETKNIVIATGSVSANLPGIEIDEEKIVTSTGALKLDKVPDNLLV
IGAGVIGLELGSVWARLGAKVTVVEFLDRILPGMDLDVAKQFQRMLSKQGFDFKLGTKVT
GIEKTESGLVATLEPAAGGEASTLQTDIALVSIGRVPFTDGLGLDDLGIERDNRGRVVTD
GHYKTNLDGIYAIGDVIAGPMLAHKAEDEGIAIAEILAGQAGHVNYSVIPGVVYTNPEVA
SVGKTEEDLKAEGIAYKAAKFPFTANGRAKAMLAPQGFVKILADKETDRVLGCHIVGKGA
GEMIHEAAVLMEFGGSAEDLARTCHAHPTMSEAVREAALGLGDGSIHI
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggccgacacatttgatctcaccataatcggcaccggaccgggcggctatgtctgcgcc
gttcgcgccgcacagcttggcatgaaggtcgccgttgtcgagaaatggccgagtttcggg
ggcacctgcctcaatatcggctgcatcccgtccaaggcgctgctgcacgcttcggaaatg
tttgaggaagccggccacacctttccccagctcggcatcgaggtcggcgcgcccaaactc
aacctgtccgccatgatggcccataaggacgataccgttgcctccaacacgggcggcatc
gaatatctgttcaaaaagaacaagataactgcctttagaggcaccggcaggattgccgcg
cagggcaaggtgaccgtcaccgccgaggatggttcggcaaccgacatcgaaaccaagaac
atcgtcatcgccaccggttcggtgtcggccaatttgccgggcatagagattgacgaagag
aaaatcgtcacttcgaccggagccctcaaactcgataaggtgccagataacctgctggtt
ataggtgccggcgtcatcggcctcgaactcggttcggtctgggcccgcctcggcgccaag
gtcacggtcgtcgaattcctcgatcgcatcctgcccggcatggatctcgacgtggccaaa
cagttccagagaatgctgtcaaaacaagggtttgacttcaaactcggcaccaaggtcacc
ggcatcgaaaagaccgaatcgggtctggttgccaccctcgaacccgccgcgggcggcgag
gcatcgacgctgcaaaccgacatcgccctggtctcgatcggccgcgttcccttcaccgac
gggctcgggctcgacgatctgggcatcgagcgcgacaatcgcggccgggtcgtaaccgac
ggacattacaagacaaatctcgacgggatctatgcgatcggggatgtgatcgccggtccg
atgctggcccacaaggccgaggatgagggcatcgccatcgccgaaatcctcgctggacag
gcgggacatgtgaattattccgttatccccggcgtggtttacaccaaccccgaagtcgcc
tcggtcggcaagaccgaagaagacctcaaggccgagggcattgcttacaaggcggcgaaa
tttccctttaccgccaatggccgtgccaaggcgatgctggccccgcaggggttcgtcaag
atccttgcggacaaggaaaccgaccgggttctgggctgtcacatcgtgggtaagggcgct
ggcgaaatgatccacgaagccgctgtgctgatggaatttggtggctcggccgaggatctt
gcccgcacctgccatgcccatcccaccatgagcgaagcagtgcgcgaggccgcgctgggg
cttggcgacgggtcgatccacatctag

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