Pelagibacterium flavum: OF122_01255
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Entry
OF122_01255 CDS
T08676
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00010
Glycolysis / Gluconeogenesis
pem00020
Citrate cycle (TCA cycle)
pem00260
Glycine, serine and threonine metabolism
pem00280
Valine, leucine and isoleucine degradation
pem00310
Lysine degradation
pem00380
Tryptophan metabolism
pem00620
Pyruvate metabolism
pem00630
Glyoxylate and dicarboxylate metabolism
pem00640
Propanoate metabolism
pem00670
One carbon pool by folate
pem00785
Lipoic acid metabolism
pem01100
Metabolic pathways
pem01110
Biosynthesis of secondary metabolites
pem01120
Microbial metabolism in diverse environments
pem01200
Carbon metabolism
pem01210
2-Oxocarboxylic acid metabolism
pem01240
Biosynthesis of cofactors
Module
pem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pem_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pem_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
OF122_01255 (lpdA)
00020 Citrate cycle (TCA cycle)
OF122_01255 (lpdA)
00620 Pyruvate metabolism
OF122_01255 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
OF122_01255 (lpdA)
00640 Propanoate metabolism
OF122_01255 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OF122_01255 (lpdA)
00280 Valine, leucine and isoleucine degradation
OF122_01255 (lpdA)
00310 Lysine degradation
OF122_01255 (lpdA)
00380 Tryptophan metabolism
OF122_01255 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
OF122_01255 (lpdA)
00670 One carbon pool by folate
OF122_01255 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pem04147
]
OF122_01255 (lpdA)
Enzymes [BR:
pem01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
OF122_01255 (lpdA)
Exosome [BR:
pem04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
OF122_01255 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
NAD_binding_8
FAD_binding_2
FAD_oxidored
GIDA
DAO
HI0933_like
FAD_binding_3
Thi4
AlaDh_PNT_C
UDPG_MGDP_dh_N
3HCDH_N
Lys_Orn_oxgnase
aRib
Motif
Other DBs
NCBI-ProteinID:
UYQ72448
LinkDB
All DBs
Position
241398..242804
Genome browser
AA seq
468 aa
AA seq
DB search
MADTFDLTIIGTGPGGYVCAVRAAQLGMKVAVVEKWPSFGGTCLNIGCIPSKALLHASEM
FEEAGHTFPQLGIEVGAPKLNLSAMMAHKDDTVASNTGGIEYLFKKNKITAFRGTGRIAA
QGKVTVTAEDGSATDIETKNIVIATGSVSANLPGIEIDEEKIVTSTGALKLDKVPDNLLV
IGAGVIGLELGSVWARLGAKVTVVEFLDRILPGMDLDVAKQFQRMLSKQGFDFKLGTKVT
GIEKTESGLVATLEPAAGGEASTLQTDIALVSIGRVPFTDGLGLDDLGIERDNRGRVVTD
GHYKTNLDGIYAIGDVIAGPMLAHKAEDEGIAIAEILAGQAGHVNYSVIPGVVYTNPEVA
SVGKTEEDLKAEGIAYKAAKFPFTANGRAKAMLAPQGFVKILADKETDRVLGCHIVGKGA
GEMIHEAAVLMEFGGSAEDLARTCHAHPTMSEAVREAALGLGDGSIHI
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacatttgatctcaccataatcggcaccggaccgggcggctatgtctgcgcc
gttcgcgccgcacagcttggcatgaaggtcgccgttgtcgagaaatggccgagtttcggg
ggcacctgcctcaatatcggctgcatcccgtccaaggcgctgctgcacgcttcggaaatg
tttgaggaagccggccacacctttccccagctcggcatcgaggtcggcgcgcccaaactc
aacctgtccgccatgatggcccataaggacgataccgttgcctccaacacgggcggcatc
gaatatctgttcaaaaagaacaagataactgcctttagaggcaccggcaggattgccgcg
cagggcaaggtgaccgtcaccgccgaggatggttcggcaaccgacatcgaaaccaagaac
atcgtcatcgccaccggttcggtgtcggccaatttgccgggcatagagattgacgaagag
aaaatcgtcacttcgaccggagccctcaaactcgataaggtgccagataacctgctggtt
ataggtgccggcgtcatcggcctcgaactcggttcggtctgggcccgcctcggcgccaag
gtcacggtcgtcgaattcctcgatcgcatcctgcccggcatggatctcgacgtggccaaa
cagttccagagaatgctgtcaaaacaagggtttgacttcaaactcggcaccaaggtcacc
ggcatcgaaaagaccgaatcgggtctggttgccaccctcgaacccgccgcgggcggcgag
gcatcgacgctgcaaaccgacatcgccctggtctcgatcggccgcgttcccttcaccgac
gggctcgggctcgacgatctgggcatcgagcgcgacaatcgcggccgggtcgtaaccgac
ggacattacaagacaaatctcgacgggatctatgcgatcggggatgtgatcgccggtccg
atgctggcccacaaggccgaggatgagggcatcgccatcgccgaaatcctcgctggacag
gcgggacatgtgaattattccgttatccccggcgtggtttacaccaaccccgaagtcgcc
tcggtcggcaagaccgaagaagacctcaaggccgagggcattgcttacaaggcggcgaaa
tttccctttaccgccaatggccgtgccaaggcgatgctggccccgcaggggttcgtcaag
atccttgcggacaaggaaaccgaccgggttctgggctgtcacatcgtgggtaagggcgct
ggcgaaatgatccacgaagccgctgtgctgatggaatttggtggctcggccgaggatctt
gcccgcacctgccatgcccatcccaccatgagcgaagcagtgcgcgaggccgcgctgggg
cttggcgacgggtcgatccacatctag
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