Pelagibacterium flavum: OF122_01555
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Entry
OF122_01555 CDS
T08676
Name
(GenBank) cisplatin damage response ATP-dependent DNA ligase
Organism
pem
Pelagibacterium flavum
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
DUF5427
Motif
Other DBs
NCBI-ProteinID:
UYQ72504
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Position
complement(304991..306568)
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AA seq
525 aa
AA seq
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MKRFATLLETLALTPSRNRKIEALAAYFRDTPDPDRGYALAVLTGALSFAHVKPARLKEA
VLAEVDPHLFALSYDYVGDLGETIALIWPHKGGTRELPSLSDLVELLNTTPKSELALLIA
ELLTSAQINERWALVKLATGGLRIGVSERLAKTALAEMSGTDLQDIEEIWHGIKLPYGDL
FAWLEGRKPKPEIDHTARFHPLMLSNPIDEEKDFSSLDPTDFVAEWKWDGIRVQLILGQG
PASLFSRTGEDIAPAFPDLVGNVFGHGVLDGELLVGSEFVPAPFNALQQRLNRKSATEKL
VREYPAFIRVYDMLFDGDEDIRALPWIDRRARLQSFFSDQTQSRLDLSELLAFSDWEQLG
VIRRQGADENGHEGVMIKLKSAPYVPGRPKGNWFKWKRDPNLVDAVLMYAQRGHGKRSSF
YSDFTFGAWRGNELVPIGKAYFGFTDAELKELDKWVRAHTIASFGPVREVEKSLVFEVAF
DSAQASTRHKSGVALRFPRINRIRWDKPAAEAASVSDVEILIPAT
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctttgcgaccctgctcgaaacccttgcgctcaccccctcgcgcaaccgcaag
atcgaagcgcttgccgcctatttccgcgatacgcccgatcccgaccgcggctatgcgctg
gcggtcctcaccggcgcgctcagcttcgcccatgtcaaacccgcccgcctcaaggaagcc
gtattggccgaagtcgacccgcatctttttgcgctcagctacgactatgtcggcgatctg
ggcgaaaccatcgcgctgatctggccccacaagggcggtacgcgcgagctgccttcgctc
tccgatctcgtcgaacttttaaacaccaccccgaaatccgaacttgcgctgctgatcgct
gaacttctgaccagcgcgcagatcaatgagcgctgggccctggtcaaactggccacgggg
ggcctgcgcatcggggtgtccgagcgccttgccaagaccgctctggccgaaatgagcggc
accgatctacaggatatcgaggaaatctggcacggcatcaaactgccctatggcgatctg
tttgcgtggcttgagggccgaaagcccaaacccgagatcgaccatacggcccgttttcat
cccctgatgctttccaaccctatcgatgaggagaaggatttctcaagccttgaccccacc
gatttcgtcgccgaatggaaatgggatggcataagggtgcaactgatcctcggccaaggc
cccgcatcgctgttctcccgcaccggcgaggatatcgccccggcctttcccgaccttgtc
ggaaacgtcttcgggcacggcgtcctcgatggcgaactgctggtcgggtccgaattcgtg
cccgcccccttcaacgccctccagcaacgtctcaaccgcaaatcggccaccgaaaagctg
gtccgcgaataccctgccttcatccgggtctatgacatgctgtttgatggcgacgaagat
atccgcgccctcccctggatcgaccgtcgcgcccgcctccagagcttcttttccgaccag
acccagtcccggctcgatctctccgaactgctcgccttttccgattgggagcaattgggc
gtcatccgccgccagggcgccgatgaaaacggccacgaaggcgtgatgatcaaactcaaa
tccgccccttatgtccccggtcgtcccaagggcaactggtttaaatggaagcgcgatccg
aaccttgtcgatgccgtcctcatgtacgcccagcgcgggcacggcaaacgctcgtccttt
tattccgacttcaccttcggcgcctggcggggcaacgagctggtgcccattggcaaggcc
tatttcggctttaccgacgccgagctcaaggaactcgacaaatgggtgcgcgcccacacc
atcgcgagtttcggcccggtgcgcgaagtggagaaatccctagtcttcgaagtcgccttc
gacagcgcccaggcctccacccgccacaaatccggcgtcgccctgcgcttcccccgcata
aaccgcatccgctgggacaagcctgccgccgaggctgccagcgtcagtgatgtcgaaatc
ctgattccagcgacgtga
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