Pelagibacterium flavum: OF122_03395
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Entry
OF122_03395 CDS
T08676
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pem03110
]
OF122_03395 (clpB)
Chaperones and folding catalysts [BR:
pem03110
]
Heat shock proteins
HSP100
OF122_03395 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
IstB_IS21
AAA_14
TniB
AAA_7
AAA_18
bpMoxR
AAA_24
AAA_3
NACHT
AAA_25
T2SSE
Torsin
Motif
Other DBs
NCBI-ProteinID:
UYQ72838
LinkDB
All DBs
Position
660787..663402
Genome browser
AA seq
871 aa
AA seq
DB search
MNIEKYTERTRGFIQSAQQMALSRGHQQFSPLHILKVLVDDPEGMATGLIDRAGGNAQAV
RAGVEDGLKKLPSVSGDSGQIYLSRELARVFETAEAAAQKAGDSFVAVERMLLALTIEKD
TDAGKILASAGVTANGLNAAIEAIRKGRTADSASAENTYDALKKYARDLTEDAREGKLDP
VIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKKKSLLA
LDMGALIAGAKYRGEFEERLKSVLSEVQSAEGQIILFIDEMHTLVGAGKADGAMDASNLL
KPALARGELHCVGATTLDEYKKHVEKDAALARRFQPVFVNEPSVEDTISILRGLKEKYEL
HHGVRISDSALVSAATLSNRYITDRFLPDKAIDLMDESSARLRMAVDSKPEALDELDRRI
IQLKIEREALKKEEDDASKTRLGRLEAELAGLEEESDAMTQRWLSEKERLAGGTKLKEQL
DAARTELELAQRKGDLARAGELAYGVIPDLERRLKDAEAHEAQPDSDMVEEVVTPNHIAQ
VVSRWTGVPVDKMLEGERDKLLRMEDELAKRVIGQSEAVEAVSRAVRRARAGLQDPNRPI
GSFMFLGPTGVGKTELTKTLAQFLFDDETAMVRLDMSEFMEKHAVARLIGAPPGYVGYDE
GGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGHTVDFRNTLIIMTS
NLGSEYLAAQPDGESVELVRGKVLDTVKASFRPEFLNRVDEILLFHRLERSQMGAIVDIQ
LKRLQKLLDTREITIEVTEAARDWLANEGYDSAYGARPLKRVIQRAVQDELAEKMLAGEI
TDGSMVKVDAGDGGLVILPVIEGEVVDTAAE
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgaaaaatacactgagcggacgcgcggattcatccagagcgcgcagcagatg
gcgctgtcgcgcggccatcagcagtttagcccgctccatatccttaaagttctggtcgat
gaccccgaaggtatggccaccgggttgatcgatcgcgccggcggcaatgcgcaggcggtt
cgggccggagttgaagacgggctcaaaaagctgccctcggtttccggcgatagcggccag
atctacctcagccgcgaattggcccgggttttcgagaccgcagaagccgcggcgcaaaag
gccggcgattcgtttgtcgctgtcgaacgcatgctgttggccctgacgattgaaaaagac
accgatgcgggcaagattcttgcctcggctggcgtcaccgccaatgggctgaacgccgcc
atcgaagcgatccgcaagggccgcaccgccgattcggcgagcgcggaaaacacctatgac
gcgctcaagaaatacgcccgtgacctcaccgaggacgcgcgcgaaggcaagctcgacccg
gtgatcggccgcgacgaggaaatccggcgcaccattcaggtgctttcccgccgcaccaag
aacaatccggtgctgatcggtgagcccggcgtgggcaagacggcgattgccgagggtctc
gcgctgcgcatcgtcaatggtgacgtccccgaatcgctgaaaaagaagtcgctgcttgcg
ctcgatatgggcgccttgatcgccggtgcgaaatatcgcggcgaattcgaagagcggctg
aaatcggttttgagcgaagttcagtccgccgaagggcagatcatcctgttcatcgacgaa
atgcacacgctggtcggcgcgggcaaggccgatggcgccatggatgcctcgaacctgttg
aagcccgccttggcacgcggcgagttgcactgcgtgggcgccacgacgctcgacgagtac
aaaaagcacgtcgaaaaggatgcggcgctggcccgccggttccagccggtgttcgtcaac
gagcccagtgtcgaggacacgatttcgatcctgcgtggattgaaggaaaaatatgaactc
caccacggcgtgcggatttccgattcggcgctggtttcggcggcaacgctcagtaaccgt
tacatcaccgaccgcttcctgcccgacaaggccatcgatctgatggacgagtcctcggcg
cggcttcgcatggctgtcgattccaagcccgaagcgctcgatgagctcgatcggcgcatc
atccagctcaagatcgagcgcgaagcgttgaaaaaggaagaggatgatgccagcaaaacc
cgccttggccggcttgaagccgaactggccgggctcgaggaagaatcggacgccatgacc
cagcgctggctctcggaaaaagagaggctggccgggggcaccaagctcaaggagcagctc
gatgcggcccgcaccgagctcgaactggcccagcgcaagggtgacctcgcccgcgccggc
gagttggcctatggggtgatccccgatctggaacgacgcctgaaagacgctgaggcccac
gaagcccagccggattcggatatggtcgaagaggtcgtcacccccaatcatatcgcccag
gtcgtgtcgcgctggaccggggttccggtcgacaagatgctcgagggcgagcgcgacaag
ctgttgcgcatggaagacgagcttgccaaacgcgtaatcggccagtccgaggcggtcgag
gcggtatcgcgcgccgtgcgccgggctcgcgccggattgcaggatcccaaccggccgatc
ggctcgttcatgttcttaggtcccacgggcgtgggcaagaccgaattgaccaagacgctg
gcccaattcctgttcgacgacgaaacggccatggtgcggctcgatatgagcgagttcatg
gagaaacacgctgttgcccgtctgatcggtgcgcctccgggctatgtcggttatgacgag
ggcggtgtgcttaccgaagccgtgcgccggcggccctatcaggtgatcctgttcgacgag
atcgaaaaggcgcaccccgatgtcttcaacgtgctcctgcaggtgctcgacgatgggcgg
ctgaccgacggtcagggccacactgtcgatttccgcaacacgctgatcatcatgacctcg
aacctggggtccgaatatctggcggcccagcccgatggcgaatcggtagagctggtgcgc
ggcaaggtgctcgatacggtcaaggcctccttccggcccgaatttttgaaccgggtggac
gaaatcttgttgttccaccggctcgaacgcagccagatgggtgccattgtcgatattcaa
ttgaagcgtctgcagaagctgctcgacacccgcgagatcaccattgaggtgaccgaagcg
gcacgcgactggctggccaacgaaggctatgactcggcctatggcgcaaggcccctcaag
cgcgttatccagcgtgcggtgcaggacgagctggccgaaaagatgctggccggtgagatc
accgacggcagcatggtaaaggtcgacgccggcgatggcgggctggtgatcctgcccgtg
atcgaaggtgaagtggtcgacacggcggccgaatag
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