KEGG   Pelagibacterium flavum: OF122_03575
Entry
OF122_03575       CDS       T08676                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pem  Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:pem00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pem02048]
    OF122_03575
Enzymes [BR:pem01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     OF122_03575
Prokaryotic defense system [BR:pem02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   OF122_03575
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII GIY-YIG
Other DBs
NCBI-ProteinID: UYQ72867
LinkDB
Position
697905..701114
AA seq 1069 aa
MSDEVTQYIQPETNFSHTGFSEALVEDAAVAILTQLGYDFRPATEIAPDGTAPLRTAYAD
VVLESVLADAVARINLDVPSEAREAAIREVLRSETPSLIEENRRIHKLIAEGIDVEFAAG
DGAFRGAKVWLIDFDDSENNDWLVTTQFTVAENRRTRRPDIIVFVNGLPLGIIELKNAGN
EQATIENAYRQLQTYKSQIPGLFRTNAVMVASDGMLARIGSLTADEDRFMPWRSATGAAD
DFTPHGPREMETLLRGVFDRERFLALIRDFTVFGDRGDGPIKIIAGYHQFHGARKALDSA
VEASRPDGDRKIGVIWHTQGSGKSLLMAFLGGLVVRSEALENPTLVVLTDRNDLDDQLYG
TFSLCKDLIRQTPQQANSRDELRQLLDRASGGVIFTTVQKFSPEKGEETFPVLTDRRNVI
VMADEAHRSQYGFDARLDTKTGQRRYGFAHYIRQALPNASFIGFTGTPIEADDVNTPAIF
GNYIDIYDVTRAVEDKATVPIYYESRLARIELDDEEKPRIDAEIEAILEDEDLTAQEKQK
AKWTTIERLVGADKRLKQIAADLVQHLETRIEGMNGGRAMAVCMSRRICVELYKHIIALR
PDWHSDDDEEGAIKIVMTGSASDPEDWQPHIGPKRRRDLLAKRARNPDDPLKLVIVRDMW
LTGFDAPAMHTMYIDKPMRGHGLMQAIARVNRVFKDKAGGLVVDYIGIASNLQKAMGQYT
ASDRSKTGIDEEEAVAALKEQFEIVRAMFHGHDYSLGITGTPQQRLVALADAIEWIGQWL
DEQSQREETIEGKKRARRRFNDAVLALSVAYGLASASDYAKAVRDDIGFFQAVRAAFSKT
SVTGKLTSSAKNFAIDQLMNAAVANAEIVDVLKAAGIKSPDISILSEAFLAEVQTMERKN
LALEALKKLINGEITSRSKSNVVEARTFFARLEEAVARYHANAISTVEMIQFMIDMAKDI
RASVARGDELGLSQEELAFYDALAANDSAVEAMGNEQLRIIASELVESMRASVTIDWHKK
VSARAKMRTLVRRILKKYGYPPDLEAEAIHTVIAQAEALLREVSPATAP
NT seq 3210 nt   +upstreamnt  +downstreamnt
atgagcgacgaagttactcaatacatccagccggagacgaacttttcccacactggcttt
tccgaggcgcttgtcgaagatgctgctgtcgcgatcctgacccaacttggttacgatttc
cgccccgcaaccgaaatagcgcccgatggcacggctccgctccgcacggcctatgcagac
gttgtgttggagagcgtgctggcggacgcggtggcccgcatcaatctcgatgtgccgtcc
gaggcacgagaggccgcgatccgggaagttctccgaagcgaaacgccttccctgatcgaa
gagaaccggcgcatccataagctgatagccgagggcatcgacgtcgaatttgctgccggg
gatggcgcgtttcgtggtgcgaaagtctggttgatcgattttgacgacagcgagaacaat
gactggcttgtcacgacccagttcactgtggctgagaaccgccggacgcgacggcccgat
attatcgtcttcgtcaacgggcttccgctcgggatcatagaactcaagaatgcaggtaat
gaacaggcgaccatcgagaacgcttatcgccaattgcagacatacaagtcgcaaattccc
ggtctgtttcgtaccaatgccgtgatggtggcatccgatgggatgttagcacgcatcggc
tcgctgacagccgatgaggatcggtttatgccttggcgcagcgcgaccggcgctgctgac
gatttcacaccacacggcccccgtgagatggaaacgctgttgcggggggtgtttgaccgc
gaacggttccttgcgctgatccgggatttcacagtctttggtgatcgcggcgatgggccg
ataaagatcatcgcggggtaccaccagtttcacggcgcacgaaaggcactcgacagtgcc
gtagaggcttcgcggcccgacggtgaccgcaagatcggcgtgatctggcacacgcaagga
tcgggtaagagccttctcatggcctttctcggtggtctggtcgtgcgctcggaggcgctg
gaaaaccccaccctcgttgtgctgaccgaccgtaacgatctcgacgaccagctttatggc
actttcagcctgtgcaaggatttgatccgccagacaccacagcaggccaatagccgggac
gaattgcggcagttgctcgaccgcgcatcaggtggagtgattttcacgacggtgcaaaaa
ttctcgccggagaagggcgaggagacattcccggtactgactgaccggcgcaatgtcatt
gtcatggccgatgaagcccatcgcagccaatatggttttgatgcgcgcctcgacacaaag
accggtcagcggcgatatggctttgcccactatatcaggcaggcactgcccaacgcctcc
tttatcgggttcaccggcacacccatcgaggccgatgacgtcaatacgcctgcgatcttt
ggcaactacatcgacatctatgacgtcacccgagccgtcgaggacaaggcgacggtgcca
atctactacgagagccgtcttgcccgcattgaactggacgatgaggaaaagcctcggatc
gatgcagagatagaagcaatccttgaagacgaagacttaactgcacaggaaaagcaaaag
gccaaatggacgacaatcgagcgtctggtcggcgctgacaaacgcctcaagcagattgct
gccgatctggttcagcatcttgagacccgcatcgaaggcatgaacggcggcagggcaatg
gccgtctgcatgagccgccgcatatgcgtcgaactttacaagcacatcatagcgttgcgt
ccagactggcattccgatgatgatgaagagggcgcgatcaaaatcgtgatgacggggtcg
gcctccgatcccgaggactggcagccgcatatcgggcccaagcgccgccgcgatcttctg
gccaagcgcgcccgcaatcctgatgacccgctcaagctggtgatcgtccgtgacatgtgg
ctgacaggctttgacgccccggcgatgcacacgatgtatatcgacaagcccatgcgcggc
cacgggctgatgcaggccatcgctcgcgtcaaccgcgtgttcaaggacaaggcgggcggg
ctggttgtcgactacatcggcatcgccagcaacctccagaaggcgatggggcaatacaca
gcctcggatcgctccaagaccggcattgatgaggaagaagccgttgccgcgctcaaggaa
cagttcgagatcgtgcgtgcgatgtttcacgggcacgactactcgctcggcatcaccggc
acgcctcagcaacggcttgtggctctcgcggatgcaatcgagtggataggccaatggctc
gatgaacagtcacagcgcgaggagaccatcgaaggcaagaagagggcgcggcggcggttc
aatgatgcagtgctggccctcagtgttgcttatggcctcgcatcggccagcgattatgcc
aaagccgtccgcgacgatatcgggttctttcaggccgttcgtgctgcgttttcgaaaacg
tctgtaactggcaagctgaccagcagcgccaagaatttcgctatcgaccagttgatgaat
gctgcagttgccaatgccgagatcgtggacgtcctgaaagctgcgggcatcaagtcgccc
gacatatcgatcttgtccgaggcttttctagctgaggtccaaacaatggagcgcaagaac
ctagcgcttgaagccctcaaaaagctcatcaatggcgaaatcacaagccggtcgaaatcc
aacgtcgttgaagccaggacgttctttgcgcgacttgaggaagcagtcgcccgctaccac
gcaaacgccatttccacggtcgagatgatccagttcatgatcgacatggccaaggacatc
cgggcgtcggtggcgcgcggagacgagttaggactatcccaggaagaactcgccttctat
gacgcactcgcggcgaatgacagcgcggtggaagcgatgggaaacgagcagttgaggatc
atcgcttctgaactggttgaaagcatgcgggcgtcggtgacaatcgattggcacaaaaag
gtcagcgcccgcgcgaaaatgcgaacgctcgtgcgccgcatactcaagaaatatggctac
ccgcccgatcttgaagcggaagcgatccatacagtcattgcgcaggcagaggcgctgttg
cgggaagtatccccggcgacggcaccctaa

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