Pelagibacterium flavum: OF122_03900
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Entry
OF122_03900 CDS
T08676
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
pem
Pelagibacterium flavum
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pem01011
]
OF122_03900
Enzymes [BR:
pem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
OF122_03900
Peptidoglycan biosynthesis and degradation proteins [BR:
pem01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
OF122_03900
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Gene cluster
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_2
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
UYQ72924
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Position
764368..765612
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AA seq
414 aa
AA seq
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MGKISRYPQRPTLHSLIGAVLVWLCLAGSALAQPVESFDAFKDRMEAVAVANGIDRDFYR
AVMGPVAPDPSIPSLISGQPEFVTPVWEYLDARIGSERIARGRAAVAANGGLLNSVGQRY
GVDPYVLAAIWGMESDYGAVLSNRSLIKPIIPSLATLAHQRRGRVAEDEAELIAALRIAR
ARGSAQGLVGSWAGAVGHLQIIPTAYLQYGQDGDGDGVVDPHTSLADALASSANYLRGLG
YRPGLDWGFEVELPEGFDYLLADRETFRPISFFAERGVARVAGRQFSDLGIEVFLYVPAG
ADGPKFLMTRNYLVFKGYNFSDSYAMAVAHLTDRLKGGGPFVTAWPRSAQFPGRQQRIEI
QTMLAQLGYYAGAIDGNIGPVTQAAYARFQANTGLVADGFVTLDAHRVLVNAVQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatatctcgatacccgcaacgaccgaccctccattctctgattggagcggtt
ttagtctggttgtgtctggctggctcagcactggcgcagcccgtcgaaagctttgacgcg
ttcaaagacaggatggaagcggttgcggttgccaatggcatagaccgtgacttctatcgt
gcggttatggggccggttgcgcccgacccttcgatcccgtctctgatctcggggcagccc
gaatttgtgacgcccgtctgggagtatctcgatgccaggatcggatcggagcgaattgcg
cgcgggcgggcggcagttgcggccaatggaggattgctgaacagtgtcgggcagcgctac
ggggtcgatccatacgtgctggcggcgatctgggggatggagtccgattatggagcggtg
ctgtccaatcgctcgctgatcaagccgatcattccttctctggcgacgcttgcccatcag
cgacgcgggcgggtggccgaagacgaggcggaactgatcgccgcgctgcggattgcgcgg
gcgcgaggatcggcacagggactggttggctcttgggccggtgcagtggggcatctccag
atcattcccacagcctatctccaatacggccaggatggggatggagatggcgttgtggac
ccccatacctcgctagccgacgcactggcctcctcggccaattatctgcgcggcttgggt
tatcgccccggcctcgattggggctttgaagtcgagctgcccgagggtttcgactatctg
ctggccgaccgggaaactttccgacccataagcttttttgccgagcgcggcgtggcgcgg
gtggccgggcggcagttttccgacctcggaatcgaggtgtttctctatgtcccggcgggg
gccgatgggccgaaatttctgatgacgcgcaattatctggtgttcaaggggtacaatttt
tccgattcctacgccatggcggtagcgcatctgactgacaggcttaagggtggcggaccg
ttcgtgaccgcgtggccacgcagtgcgcagtttcccggtcgccagcagcggattgaaatc
caaacgatgctggcgcaattggggtactatgcgggtgcgatcgacggcaatatcggaccg
gtgacgcaggcggcctatgcaaggtttcaggcaaataccggattggtggctgatgggttc
gtgacgctggatgcgcatcgagtgctggtcaatgccgttcaatag
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