Pelagibacterium flavum: OF122_03965
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Entry
OF122_03965 CDS
T08676
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
pem
Pelagibacterium flavum
Pathway
pem02010
ABC transporters
pem02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OF122_03965
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OF122_03965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pem02000
]
OF122_03965
Transporters [BR:
pem02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
OF122_03965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
HMD
Motif
Other DBs
NCBI-ProteinID:
UYQ74052
UniProt:
A0ABY6IXJ0
LinkDB
All DBs
Position
complement(780730..781893)
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AA seq
387 aa
AA seq
DB search
MASAMAGSAYAIDVKIGVLNDRSGIYADLSGEGSVIAAQMAVEDFMAADKGINVEIISAD
HQNKPDVASNIARQWYDEEGVHAIFDVPTSSAALAVNEITREKDRIFINSGAGSADLTGS
QCSPNTIHWTYDTWALANGTGSAMVETGADSWFFLTADYAFGHALETDTAAVVEAAGGEV
LGTVRHPFPGQDFSSYLLQAQSSGAEVIGLANAGGDTINAIKQASEFGITQSGQSLAALL
MFITDVHALGLETAQGLVLTESFYWDLNDGTREWSQRFAEQNDGDMPTMVHAGVYAGVLH
YLKAIEETQSVEAGPVMEAMKAMPTSDPLFGEGEVRADGRKIHDMYLFRVKSPDQSEGPW
DYYELGYTIPAENAFRPLDQGGCELVD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgccatggccggttcggcctatgcgatcgacgtcaagatcggcgtcctcaac
gatcgctcgggcatctacgccgatctttccggcgaaggctcggtgatcgccgcccagatg
gccgtcgaggacttcatggctgccgacaagggcatcaatgtcgaaatcatctcggccgac
caccagaacaagcccgacgtggcatccaatatcgcccgccagtggtatgatgaagagggc
gtccacgccattttcgacgttcccacctcatcggccgccctcgccgtcaatgaaatcacc
cgcgagaaagaccggatcttcatcaattccggcgccggctcggcggacctgacgggctcg
caatgctcgcccaacacgatccactggacctacgacacctgggcgctcgccaacggcacc
ggctcggcaatggtggaaaccggcgccgacagctggttcttcctcaccgccgattacgcc
ttcggccacgcgcttgaaaccgacaccgccgcagtcgtcgaagcggccggcggcgaagtg
ctgggcacggtgcgccaccccttccccggccaggatttctcctcctacctgcttcaggct
cagtcctcgggggccgaggtgatcggtctcgccaatgcgggcggtgacaccatcaacgcc
atcaagcaggcctccgaattcggcatcacccagtccggccagtcgctggcggcgcttctg
atgttcatcaccgacgtgcacgcgctcggcctcgaaaccgcccagggcctcgttctcacc
gaaagcttttactgggatctcaacgacggcacccgcgaatggtcgcagcgtttcgccgag
cagaacgatggcgacatgcccacaatggtccatgccggcgtctatgcgggcgtgctgcac
tatctcaaggccatcgaggaaacccagagcgtagaggccggccccgtcatggaagcgatg
aaggccatgccgacatccgatccgctgttcggcgaaggtgaagtccgcgccgacggccgc
aagatccacgacatgtacctgttccgggtcaaatcgcccgaccagtccgaaggcccgtgg
gattattatgaactcggctacacgatcccggccgaaaacgccttccgcccgctcgaccag
ggcggctgcgagctggtggattaa
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