Pelagibacterium flavum: OF122_04105
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Entry
OF122_04105 CDS
T08676
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K15861
CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
Organism
pem
Pelagibacterium flavum
Pathway
pem02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OF122_04105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pem03000
]
OF122_04105
Transcription factors [BR:
pem03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
OF122_04105
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
MarR_2
HTH_20
HVO_A0261_N
Sigma70_r4
HTH_11
HTH_23
Sigma70_r4_2
HTH_IclR
MarR
HTH_24
DUF4423
Motif
Other DBs
NCBI-ProteinID:
UYQ72958
UniProt:
A0ABY6IQS0
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Position
815751..816389
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AA seq
212 aa
AA seq
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MLIQKDFRNPGSGFTAKALLEGVNLGGTVRHREKDLIYAQGDEAGEIFIVEFGCVRVSRI
TLEGRRLVTGFYFAGEVFGFETGAERQCYAEALEYSGTRNFHLDDKDLANPQIADMLYRH
LESIHQHLLILGTQNSIERVAAFLVGIADRREGGGTKARLPMSRGDIADHLGLTLETVSR
AIHRLQVLKLITLVGAREVILLDRDALLDLGA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgttaatacagaaggactttcgcaatccgggttctggctttaccgcaaaagcgcttctg
gagggggtcaacctcggtggaaccgtccggcacagggaaaaagaccttatctacgcacaa
ggggatgaggccggcgagatcttcatcgtagagttcggttgcgtgcgggtttcgcggata
acgctggagggccgccggctggtcacgggcttttatttcgcgggcgaggttttcggcttt
gaaacgggcgcggaacgccaatgctatgccgaggcgctcgaatattcaggtacgcggaat
tttcatctcgacgacaaggacctggccaacccgcaaatcgccgacatgctgtatcgccat
ctcgaaagcatacaccagcacctgctcattctgggaacgcagaattccatcgaacgggtg
gccgcatttctggtggggatcgcggaccggcgtgaaggtggcggcaccaaggcgcgcctg
cccatgtcgcggggtgatattgccgatcatctcgggctcacgctggagacggtatcgcgc
gcaattcaccgcctgcaggtcctcaagctgataacgctggtgggtgcgcgtgaggtcata
ttgctggaccgggacgcgcttctcgatctgggtgcatag
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