Pelagibacterium flavum: OF122_04115
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Entry
OF122_04115 CDS
T08676
Name
(GenBank) PAS domain S-box protein
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
pem
Pelagibacterium flavum
Pathway
pem02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OF122_04115
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pem01001
]
OF122_04115
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pem02022
]
OF122_04115
Enzymes [BR:
pem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
OF122_04115
Protein kinases [BR:
pem01001
]
Histidine kinases
LuxR family [OT]
OF122_04115
Two-component system [BR:
pem02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
OF122_04115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS
PAS_9
HisKA
PAS_8
HATPase_c_5
PAS_4
HATPase_c_3
DUF4118
Motif
Other DBs
NCBI-ProteinID:
UYQ72960
LinkDB
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Position
complement(817094..818518)
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AA seq
474 aa
AA seq
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MVGLAGLILVSTLKLAIAPVFTSSFNGLFFALAILLAAGMGGLAPGVFTMVLALPLVYFF
TEEASISRGPDLILFAGVGFGIAWLGGVLREERNKALLASKLLQRRESYLQAILDTISDA
TIASKPSGEIVSFNAAAERLFGYREEVVLTRNVRVLMADPYPPEENARADHPATGLARFI
GRNRLVRGKRSDGTTFPMSIDVVRITTGEGLLFIGFVRDMTERERAATRLEQTEAELARL
SRMSEMGEMASALAHEINQPLSAVSNYVQGAKRMLELFDPAMLPALRDSLAAAATQALRA
GDIIHHLCIFMAQGEIDKEIVDVNSLIEGAMALALAGTREDGILVELDLAPGGLEILGNP
TQIQQVIVNLLRNAADAVRASERKVITIRTRRNGSFARIELSDTGHGISPNFGEEIFKAF
VTTKRSGMGVGLSISKRIIEAHGGAISARSVAGRETIFTFTLPLVDKEIQAHDK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttggttggactagcgggactgatccttgttagtacactaaagcttgccatcgccccggta
ttcacgtcctcatttaacggtctttttttcgcgctggccattctgcttgctgccggcatg
ggtggattggcgcccggcgtgttcaccatggttctggcacttccgctggtgtattttttt
accgaggaagcaagtatctcgcggggcccggacctgattttgtttgccggcgtgggtttt
ggcatcgcttggctcggcggcgttctgcgcgaggagcgcaacaaggcgctgctggccagc
aagctcctgcaaagacgcgaaagctacctgcaagccatcctcgataccatctcggacgca
acgatagccagcaagcccagcggagaaatcgtttctttcaatgccgctgccgaaaggctg
tttggctatcgcgaggaggtggtcctgacccgcaacgtcagggtcttgatggccgatccc
tatccgcccgaagaaaacgcccgcgccgaccatcccgccaccggacttgcccgcttcatt
ggccgcaaccgcttggtgcgaggaaagcgcagcgacggcacgaccttccccatgagcatc
gacgtggtcaggatcaccacgggcgaaggcctgctctttatcggctttgtgcgcgacatg
acagaacgtgagcgcgccgcgacccggctcgaacagaccgaggccgaactggcccggctg
tcgcgcatgagtgagatgggggaaatggcctcggccctggcccatgaaatcaaccagccg
ctttcagcggtcagcaactacgtccagggcgccaagcgcatgctcgagttgttcgacccg
gccatgcttccagccctgcgcgattcccttgccgctgccgcaacccaggccctgcgtgcg
ggcgacatcatccaccatctttgcattttcatggcacagggcgagatcgacaaggaaatc
gtggacgtcaactcgctgatcgaaggcgccatggcgctggcgctggccggcacgcgggaa
gacggcattctcgtcgaactcgatctcgcgcccggcggcctggaaatcctgggcaatccg
acccagatccagcaggtgatcgtcaatctcctgcgcaatgcggcagacgcggtgcgcgcc
agcgagcgcaaggtcatcaccatacgaacgcgccggaacggcagcttcgcccgcatcgaa
ctcagcgacaccgggcacggcatttctcccaatttcggcgaggaaatcttcaaggcgttc
gtaacaaccaaacgcagcggcatgggggttggtctctcaatttccaagcgcataatcgaa
gcacatggaggtgcgataagcgcccgttccgtagcgggcagagaaacgattttcacgttc
accctacccttggtcgacaaagagattcaggcccatgacaaatga
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